ENST00000246891.9 CSN1S1

Information
Transcript ID
ENST00000246891.9
Genome
hg38
Position
chr4:69,931,068-69,946,574
Strand
+
CDS length
558
Amino acid length
186
Gene symbol
CSN1S1
Gene type
protein-coding
Gene description
casein alpha s1
Gene Entrez Gene ID
1446
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 69,931,068 69,931,117
2 69,932,544 69,932,606
3 69,934,212 69,934,244
4 69,934,690 69,934,710
5 69,935,926 69,935,949
6 69,936,456 69,936,479
7 69,936,566 69,936,607
8 69,937,121 69,937,144
9 69,937,800 69,937,823
10 69,939,176 69,939,208
11 69,940,021 69,940,044
12 69,941,019 69,941,060
13 69,942,046 69,942,063
14 69,942,536 69,942,577
15 69,944,850 69,945,004
16 69,946,196 69,946,574
CDS
Exon number Type Start Stop
2 CDS 69,932,556 69,932,606
3 CDS 69,934,212 69,934,244
4 CDS 69,934,690 69,934,710
5 CDS 69,935,926 69,935,949
6 CDS 69,936,456 69,936,479
7 CDS 69,936,566 69,936,607
8 CDS 69,937,121 69,937,144
9 CDS 69,937,800 69,937,823
10 CDS 69,939,176 69,939,208
11 CDS 69,940,021 69,940,044
12 CDS 69,941,019 69,941,060
13 CDS 69,942,046 69,942,063
14 CDS 69,942,536 69,942,577
15 CDS 69,944,850 69,945,004
16 CDS 69,946,196 69,946,196
Other genome
Genome Chromosome Start End Links
hg19 chr4 70,796,786 70,812,292 Link
CDS sequence
ATGAGGCTTCTCATTCTCACCTGTCTTGTGGCTGTTGCTCTTGCCAGGCCTAAACTTCCTCTTAGATACCCAGAACGCCTTCAGAATCCATCAGAGAGCAGTGAGCCTATACCATTAGAATCAAGAGAGGAATACATGAATGGTATGAACAGGCAGAGAAACATTCTGAGAGAAAAACAGACTGATGAAATCAAGGATACTAGGAATGAGTCTACTCAGAACTGTGTTGTGGCAGAGCCTGAGAAGATGGAATCCAGCATCAGTTCATCGAGTGAGGAAATGTCTCTCAGTAAGTGTGCGGAACAGTTTTGTAGACTGAACGAATACAACCAACTTCAGCTGCAAGCTGCCCATGCCCAGGAGCAAATTCGCAGAATGAATGAAAACAGCCATGTCCAAGTGCCTTTCCAGCAGCTCAACCAACTTGCTGCCTACCCCTATGCTGTTTGGTACTATCCACAAATCATGCAGTATGTTCCTTTCCCACCGTTTTCCGACATCTCCAATCCCACTGCTCATGAAAATTATGAAAAAAATAACGTCATGCTACAGTGGTGA
Amino sequence
MRLLILTCLVAVALARPKLPLRYPERLQNPSESSEPIPLESREEYMNGMNRQRNILREKQTDEIKDTRNESTQNCVVAEPEKMESSISSSSEEMSLSKCAEQFCRLNEYNQLQLQAAHAQEQIRRMNENSHVQVPFQQLNQLAAYPYAVWYYPQIMQYVPFPPFSDISNPTAHENYEKNNVMLQW*