ENST00000410107.5 GCNT2

Information
Transcript ID
ENST00000410107.5
Genome
hg38
Position
chr6:10,492,223-10,627,222
Strand
+
CDS length
351
Amino acid length
117
Gene symbol
GCNT2
Gene type
protein-coding
Gene description
glucosaminyl (N-acetyl) transferase 2 (I blood group)
Gene Entrez Gene ID
2651
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 10,492,223 10,492,394
2 10,492,820 10,492,931
3 10,509,087 10,509,158
4 10,621,351 10,621,443
5 10,626,417 10,627,222
CDS
Exon number Type Start Stop
3 CDS 10,509,092 10,509,158
4 CDS 10,621,351 10,621,443
5 CDS 10,626,417 10,626,607
Other genome
Genome Chromosome Start End Links
hg19 chr6 10,492,456 10,627,455 Link
CDS sequence
ATGGAAGGAAAGATTTTTGGAAGCAGCTTCTTGTGTCCGACCCGCTGTGATCAGCTGCTACTCCCAGGTGTTCCTGGCTCTATGCCAAATGCATCCTGGACTGGAAACCTCAGAGCTATAAAGTGGAGTGACATGGAAGACAGACACGGAGGCTGCCACGGCCACTATGTACATGGTATTTGTATCTATGGAAACGGAGACTTAAAGTGGCTGGTTAATTCACCAAGCCTGTTTGCTAACAAGTTTGAGCTTAATACCTACCCCCTTACTGTGGAATGCCTAGAACTGAGGCATCGCGAAAGAACCCTCAATCAGAGTGAAACTGCGATACAACCCAGCTGGTATTTTTGA
Amino sequence
MEGKIFGSSFLCPTRCDQLLLPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWYF*