ENST00000409241.5 RAD21L1
Information
- Transcript ID
- ENST00000409241.5
- Genome
- hg38
- Position
- chr20:1,226,120-1,254,501
- Strand
- +
- CDS length
- 1,671
- Amino acid length
- 557
- Gene symbol
- RAD21L1
- Gene type
- protein-coding
- Gene description
- RAD21 cohesin complex component like 1
- Gene Entrez Gene ID
- 642636
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 1,226,120 | 1,226,180 |
| 2 | 1,228,422 | 1,228,597 |
| 3 | 1,229,880 | 1,230,009 |
| 4 | 1,231,526 | 1,231,619 |
| 5 | 1,234,085 | 1,234,191 |
| 6 | 1,238,044 | 1,238,214 |
| 7 | 1,239,312 | 1,239,407 |
| 8 | 1,240,321 | 1,240,434 |
| 9 | 1,242,619 | 1,242,845 |
| 10 | 1,243,097 | 1,243,196 |
| 11 | 1,244,046 | 1,244,170 |
| 12 | 1,246,210 | 1,246,305 |
| 13 | 1,248,626 | 1,248,703 |
| 14 | 1,254,269 | 1,254,501 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 1,228,454 | 1,228,597 |
| 3 | CDS | 1,229,880 | 1,230,009 |
| 4 | CDS | 1,231,526 | 1,231,619 |
| 5 | CDS | 1,234,085 | 1,234,191 |
| 6 | CDS | 1,238,044 | 1,238,214 |
| 7 | CDS | 1,239,312 | 1,239,407 |
| 8 | CDS | 1,240,321 | 1,240,434 |
| 9 | CDS | 1,242,619 | 1,242,845 |
| 10 | CDS | 1,243,097 | 1,243,196 |
| 11 | CDS | 1,244,046 | 1,244,170 |
| 12 | CDS | 1,246,210 | 1,246,305 |
| 13 | CDS | 1,248,626 | 1,248,703 |
| 14 | CDS | 1,254,269 | 1,254,457 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 1,206,764 | 1,235,145 | Link |
CDS sequence
ATGTTCTACACACATGTGCTTATGAGTAAACGAGGGCCATTGGCCAAAATATGGCTTGCAGCTCACTGGGAGAAGAAACTCACAAAGGCCCATGTATTTGAATGTAATCTAGAGATAACCATTGAAAAAATTCTTTCACCCAAGGTGAAAATAGCACTTCGAACTTCAGGACACCTTCTTTTGGGAGTTGTTCGAATCTATAACAGGAAGGCAAAATATCTTTTGGCAGATTGCAGTGAAGCATTTCTTAAAATGAAGATGACATTTTGCCCAGGACTGGTTGACCTTCCAAAAGAGAATTTTGAAGCATCTTACAATGCTATCACATTGCCAGAAGAATTTCATGATTTTGACACCCAAAATATGAATGCTATTGATGTTTCAGAACACTTTACTCAGAACCAAAGCAGACCAGAAGAAATCACTCTTAGAGAAAATTTTGACAATGATCTAATTTTCCAAGCTGAGAGCTTTGGGGAGGAATCTGAAATTCTCAGAAGACATAGCTTCTTTGATGACAACATATTACTGAATTCCAGTGGTCCTTTAATTGAACATAGTTCTGGAAGCCTCACTGGAGAACGATCTCTATTCTATGACAGTGGAGATGGGTTTGGAGATGAAGGAGCTGCAGGAGAAATGATTGACAATCTATTGCAAGATGATCAGAATATCCTGTTAGAAGACATGCATTTGAACAGAGAAATTTCCCTGCCTTCTGAGCCTCCCAATAGTTTAGCAGTTGAACCAGATAACTCAGAGTGTATATGTGTACCTGAAAATGAAAAAATGAATGAAACAATATTATTATCAACTGAAGAGGAAGGATTTACCCTTGATCCAATTGATATTTCAGACATTGCTGAGAAAAGGAAAGGCAAAAAGAGGAGATTGCTCATAGATCCTATCAAGGAGCTCAGTAGCAAAGTTATACATAAACAGCTTACTTCCTTTGCGGACACACTCATGGTTTTGGAACTTGCACCTCCTACCCAAAGATTGATGATGTGGAAGAAGAGGGGAGGAGTGCATACACTTCTGTCAACTGCTGCCCAGGATTTGATTCATGCTGAACTGAAAATGTTGTTTACAAAATGCTTTCTGTCCTCTGGCTTTAAACTTGGAAGAAAAATGATACAGAAGGAGTCAGTAAGGGAAGAAGTGGGAAACCAAAATATAGTAGAGACATCCATGATGCAAGAGCCAAATTACCAGCAAGAGTTAAGTAAACCCCAAACTTGGAAGGATGTGATTGGTGGATCTCAGCATAGCTCTCATGAGGATACCAATAAAAATATTAACTCTGAGCAGGATATTGTTGAAATGGTGTCTTTAGCTGCTGAGGAATCATCTTTAATGAATGACTTATTTGCACAAGAAATTGAATATAGTCCAGTTGAATTGGAGTCATTGAGCAATGAAGAAAATATTGAGACAGAGAGATGGAATGGAAGAATACTTCAGATGTTAAATCGTTTACGGGAATCTAACAAGATGGGAATGCAGTCCTTTAGTCTGATGAAGCTCTGTAGAAATAGTGACCGAAAACAAGCAGCTGCCAAATTTTATAGCTTTCTTGTCCTAAAGAAACAGCTGGCTATTGAGCTGAGCCAGAGTGCTCCCTATGCAGATATTATAGCTACGATGGGACCAATGTTTTATAACATATGA
Amino sequence
MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLLLGVVRIYNRKAKYLLADCSEAFLKMKMTFCPGLVDLPKENFEASYNAITLPEEFHDFDTQNMNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFGEESEILRRHSFFDDNILLNSSGPLIEHSSGSLTGERSLFYDSGDGFGDEGAAGEMIDNLLQDDQNILLEDMHLNREISLPSEPPNSLAVEPDNSECICVPENEKMNETILLSTEEEGFTLDPIDISDIAEKRKGKKRRLLIDPIKELSSKVIHKQLTSFADTLMVLELAPPTQRLMMWKKRGGVHTLLSTAAQDLIHAELKMLFTKCFLSSGFKLGRKMIQKESVREEVGNQNIVETSMMQEPNYQQELSKPQTWKDVIGGSQHSSHEDTNKNINSEQDIVEMVSLAAEESSLMNDLFAQEIEYSPVELESLSNEENIETERWNGRILQMLNRLRESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSAPYADIIATMGPMFYNI*