ENST00000222567.6 POLR1F
Information
- Transcript ID
- ENST00000222567.6
- Genome
- hg38
- Position
- chr7:19,695,461-19,709,037
- Strand
- -
- CDS length
- 1,017
- Amino acid length
- 339
- Gene symbol
- POLR1F
- Gene type
- protein-coding
- Gene description
- RNA polymerase I subunit F
- Gene Entrez Gene ID
- 221830
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 19,695,461 | 19,698,727 |
| 3 | 19,700,072 | 19,700,280 |
| 2 | 19,704,779 | 19,704,920 |
| 1 | 19,708,763 | 19,709,037 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 19,698,316 | 19,698,727 |
| 3 | CDS | 19,700,072 | 19,700,280 |
| 2 | CDS | 19,704,779 | 19,704,920 |
| 1 | CDS | 19,708,763 | 19,709,016 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 19,735,084 | 19,748,660 | Link |
CDS sequence
ATGGCTGCAGGTTGCTCAGAGGCGCCGCGGCCAGCGGCGGCTTCTGATGGGTCTCTGGTAGGGCAGGCTGGCGTCCTGCCTTGCCTAGAGTTGCCGACTTATGCCGCTGCTTGTGCGCTGGTGAACAGTCGCTACTCATGCCTGGTGGCCGGGCCGCACCAAAGGCACATCGCGCTGTCGCCCCGCTACCTTAACAGGAAACGCACCGGCATTCGAGAACAGCTTGATGCGGAGCTCCTTCGCTATTCTGAGAGCCTTTTAGGTGTCCCTATTGCATATGATAACATCAAAGTTGTGGGAGAGCTTGGAGATATTTATGATGATCAAGGACACATTCATCTTAACATTGAAGCCGATTTTGTTATTTTCTGCCCTGAACCAGGGCAGAAGCTTATGGGTATAGTTAATAAAGTGTCTTCTAGCCACATTGGCTGTTTAGTACATGGGTGTTTCAATGCCTCCATTCCTAAACCTGAGCAGTTGTCAGCTGAGCAGTGGCAAACCATGGAGATAAACATGGGTGATGAACTAGAATTTGAAGTATTTCGTTTAGACTCAGATGCTGCTGGAGTATTCTGCATTCGGGGAAAACTAAATATCACAAGTTTACAATTCAAGCGCTCTGAAGTTTCTGAAGAAGTTACAGAAAATGGCACTGAGGAAGCTGCTAAAAAACCTAAAAAGAAGAAAAAGAAGAAAGACCCAGAGACATATGAAGTGGACAGTGGTACCACAAAGCTAGCAGATGATGCAGATGACACTCCAATGGAAGAGTCAGCCCTGCAGAATACTAATAATGCGAATGGCATCTGGGAGGAGGAGCCAAAGAAAAAGAAGAAGAAGAAAAAGCACCAGGAAGTTCAGGACCAGGACCCTGTTTTCCAAGGCAGTGACTCCAGTGGTTACCAAAGTGACCATAAAAAGAAAAAAAAGAAAAGAAAACACAGTGAAGAGGCCGAATTTACCCCACCTTTGAAATGCTCACCAAAAAGAAAAGGGAAAAGTAATTTTCTTTAG
Amino sequence
MAAGCSEAPRPAAASDGSLVGQAGVLPCLELPTYAAACALVNSRYSCLVAGPHQRHIALSPRYLNRKRTGIREQLDAELLRYSESLLGVPIAYDNIKVVGELGDIYDDQGHIHLNIEADFVIFCPEPGQKLMGIVNKVSSSHIGCLVHGCFNASIPKPEQLSAEQWQTMEINMGDELEFEVFRLDSDAAGVFCIRGKLNITSLQFKRSEVSEEVTENGTEEAAKKPKKKKKKKDPETYEVDSGTTKLADDADDTPMEESALQNTNNANGIWEEEPKKKKKKKKHQEVQDQDPVFQGSDSSGYQSDHKKKKKKRKHSEEAEFTPPLKCSPKRKGKSNFL*