ENST00000536551.6 STMND1
Information
- Transcript ID
- ENST00000536551.6
- Genome
- hg38
- Position
- chr6:17,102,050-17,131,378
- Strand
- +
- CDS length
- 831
- Amino acid length
- 277
- Gene symbol
- STMND1
- Gene type
- protein-coding
- Gene description
- stathmin domain containing 1
- Gene Entrez Gene ID
- 401236
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 17,102,050 | 17,102,338 |
| 2 | 17,114,962 | 17,115,139 |
| 3 | 17,120,607 | 17,120,758 |
| 4 | 17,129,112 | 17,129,243 |
| 5 | 17,130,594 | 17,131,378 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 17,102,258 | 17,102,338 |
| 2 | CDS | 17,114,962 | 17,115,139 |
| 3 | CDS | 17,120,607 | 17,120,758 |
| 4 | CDS | 17,129,112 | 17,129,243 |
| 5 | CDS | 17,130,594 | 17,130,881 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 17,102,281 | 17,131,609 | Link |
CDS sequence
ATGGGCTGTGGACCTTCCCAACCTGCTGAAGACCGGAGACGTGTACGCGCGCCCAAGAAGGGCTGGAAAGAGGAATTCAAGGCTGATGTCAGTGTGCCTCATACTGGGGAAAATTGCAGCCCCCGGATGGAAGCTGCTCTGACCAAGAATACTGTGGACATTGCAGAAGGCCTGGAACAAGTCCAGATGGGAAGCTTACCTGGAACCATTTCAGAAAATTCTCCATCTCCTAGTGAAAGAAACAGACGAGTAAATTCAGACCTAGTGACCAATGGATTAATCAATAAACCCCAATCCCTAGAGAGTCGAGAGCGACAGAAGTCATCAGATATCCTGGAGGAACTAATTGTTCAAGGAATTATACAAAGCCACAGCAAAGTATTTAGAAATGGAGAATCATATGATGTCACGTTGACTACGACTGAGAAGCCATTGAGAAAGCCACCTTCCAGACTGAAAAAACTCAAGATCAAAAAGCAAGTGAAGGATTTCACAATGAAGGACATCGAGGAGAAGATGGAGGCTGCCGAGGAGCGCAGGAAGACTAAAGAAGAAGAAATAAGAAAAAGGCTACGGAGTGACCGACTTTTGCCTTCAGCCAATCACTCAGATTCAGCTGAATTAGATGGGGCCGAGGTTGCATTTGCCAAAGGACTTCAAAGGGTGAGGTCTGCTGGATTTGAACCATCTGACCTGCAGGGAGGAAAACCATTGAAGAGGAAGAAGAGTAAATGTGATGCAACCTTGATTGATAGAAACGAAAGTGATGAAAGTTTTGGGGTCGTGGAGTCAGACATGTCCTACAACCAAGCAGATGACATAGTCTACTAA
Amino sequence
MGCGPSQPAEDRRRVRAPKKGWKEEFKADVSVPHTGENCSPRMEAALTKNTVDIAEGLEQVQMGSLPGTISENSPSPSERNRRVNSDLVTNGLINKPQSLESRERQKSSDILEELIVQGIIQSHSKVFRNGESYDVTLTTTEKPLRKPPSRLKKLKIKKQVKDFTMKDIEEKMEAAEERRKTKEEEIRKRLRSDRLLPSANHSDSAELDGAEVAFAKGLQRVRSAGFEPSDLQGGKPLKRKKSKCDATLIDRNESDESFGVVESDMSYNQADDIVY*