ENST00000682480.1 LRPPRC

Information
Transcript ID
ENST00000682480.1
Genome
hg38
Position
chr2:43,888,510-43,995,979
Strand
-
CDS length
4,203
Amino acid length
1,401
Gene symbol
LRPPRC
Gene type
protein-coding
Gene description
leucine rich pentatricopeptide repeat containing
Gene Entrez Gene ID
10128
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
38 43,888,510 43,888,656
37 43,889,734 43,889,876
36 43,894,545 43,894,629
35 43,896,634 43,896,708
34 43,899,219 43,899,334
33 43,899,466 43,899,605
32 43,901,320 43,901,524
31 43,905,692 43,905,780
30 43,912,432 43,912,558
29 43,918,025 43,918,151
28 43,918,256 43,918,398
27 43,925,067 43,925,157
26 43,925,893 43,925,961
25 43,934,190 43,934,296
24 43,934,754 43,934,878
23 43,943,687 43,943,894
22 43,945,332 43,945,417
21 43,946,113 43,946,243
20 43,947,257 43,947,370
19 43,947,731 43,947,775
18 43,948,122 43,948,199
17 43,948,412 43,948,518
16 43,949,602 43,949,659
15 43,950,573 43,950,600
14 43,957,385 43,957,451
13 43,960,541 43,960,634
12 43,963,588 43,963,706
11 43,973,607 43,973,714
10 43,973,795 43,973,900
9 43,974,150 43,974,295
8 43,974,614 43,974,758
7 43,975,091 43,975,217
6 43,976,143 43,976,229
5 43,976,994 43,977,052
4 43,977,155 43,977,276
3 43,979,826 43,979,948
2 43,982,238 43,982,434
1 43,995,799 43,995,979
CDS
Exon number Type Start Stop
38 CDS 43,888,600 43,888,656
37 CDS 43,889,734 43,889,876
36 CDS 43,894,545 43,894,629
35 CDS 43,896,634 43,896,708
34 CDS 43,899,219 43,899,334
33 CDS 43,899,466 43,899,605
32 CDS 43,901,320 43,901,524
31 CDS 43,905,692 43,905,780
30 CDS 43,912,432 43,912,558
29 CDS 43,918,025 43,918,151
28 CDS 43,918,256 43,918,398
27 CDS 43,925,067 43,925,157
26 CDS 43,925,893 43,925,961
25 CDS 43,934,190 43,934,296
24 CDS 43,934,754 43,934,878
23 CDS 43,943,687 43,943,894
22 CDS 43,945,332 43,945,417
21 CDS 43,946,113 43,946,243
20 CDS 43,947,257 43,947,370
19 CDS 43,947,731 43,947,775
18 CDS 43,948,122 43,948,199
17 CDS 43,948,412 43,948,518
16 CDS 43,949,602 43,949,659
15 CDS 43,950,573 43,950,600
14 CDS 43,957,385 43,957,451
13 CDS 43,960,541 43,960,634
12 CDS 43,963,588 43,963,706
11 CDS 43,973,607 43,973,714
10 CDS 43,973,795 43,973,900
9 CDS 43,974,150 43,974,295
8 CDS 43,974,614 43,974,758
7 CDS 43,975,091 43,975,217
6 CDS 43,976,143 43,976,229
5 CDS 43,976,994 43,977,052
4 CDS 43,977,155 43,977,276
3 CDS 43,979,826 43,979,948
2 CDS 43,982,238 43,982,434
1 CDS 43,995,799 43,995,947
Other genome
Genome Chromosome Start End Links
hg19 chr2 44,115,649 44,223,118 Link
CDS sequence
ATGGCAGCCCTGCTGAGATCCGCGCGTTGGTTGCTGCGTGCCGGGGCGGCCCCGCGCCTCCCGCTCTCCCTGCGCCTCCTCCCTGGCGGCCCGGGCCGGCTGCATGCCGCCTCCTATCTGCCCGCCGCTCGCGCCGGGCCCGTGGCCGGAGGACTACTGAGCCCAGCCAGGCTGTATGCCATTGCTGCCAAAGAAAAAGATATTCAAGAGGAGTCCACTTTTTCTTCTAGGAAGATTTCCAATCAGTTTGATTGGGCTCTAATGAGACTAGATCTTTCTGTTCGAAGAACTGGCCGCATTCCAAAGAAGCTTCTACAAAAAGTTTTTAATGATACCTGCCGCTCAGGTGGCCTAGGTGGTAGTCATGCCTTGCTTCTACTACGTAGTTGTGGTTCTCTCTTGCCTGAACTAAAGCTTGAAGAGAGAACAGAATTTGCTCATAGGATATGGGACACACTTCAGAAATTAGGTGCTGTGTATGATGTGAGTCACTATAATGCTTTACTTAAAGTCTATCTTCAAAATGAATATAAATTCTCACCAACTGATTTCCTGGCAAAAATGGAGGAAGCAAACATTCAACCAAATCGAGTGACATACCAGAGATTGATTGCTTCTTATTGTAATGTAGGAGATATTGAAGGTGCCAGCAAGATTCTTGGATTTATGAAAACTAAGGATCTCCCAGTTACAGAGGCAGTATTCAGTGCCCTTGTGACAGGGCATGCCAGAGCTGGTGATATGGAGAATGCAGAAAACATTCTCACAGTGATGAGAGATGCCGGAATTGAGCCTGGTCCAGACACATACCTCGCATTATTGAATGCATATGCTGAGAAGGGCGACATTGACCATGTTAAGCAGACTCTGGAGAAGGTGGAGAAGTCCGAGCTTCACCTTATGGACCGTGATTTACTGCAAATTATTTTTAGCTTCAGTAAAGCTGGGTATCCTCAGTATGTCTCAGAAATTTTGGAAAAAGTTACATGTGAAAGAAGATATATTCCAGATGCAATGAACCTCATTTTACTTTTAGTCACTGAAAAATTGGAAGATGTAGCGTTGCAAATTTTACTAGCATGCCCCGTATCAAAGGAAGATGGCCCAAGTGTCTTTGGCAGTTTCTTTTTACAACACTGTGTGACTATGAATACGCCTGTGGAGAAGCTAACAGACTACTGTAAGAAGTTAAAGGAAGTCCAGATGCACTCCTTTCCTCTGCAGTTCACCCTCCATTGTGCTTTACTCGCCAATAAAACTGATTTGGCAAAAGCCTTAATGAAGGCTGTGAAGGAGGAAGGTTTTCCTATCAGACCTCACTATTTCTGGCCATTGCTAGTTGGACGTCGGAAGGAAAAAAATGTTCAAGGTATAATTGAAATCCTCAAAGGAATGCAAGAATTGGGAGTACATCCTGATCAGGAAACATATACAGATTATGTGATTCCATGCTTTGATAGTGTAAACTCAGCACGAGCCATTTTGCAGGAAAATGGATGTCTGTCTGATAGTGATATGTTTTCTCAAGCTGGATTGAGAAGTGAAGCAGCAAATGGGAACTTAGACTTTGTATTATCATTTTTGAAATCAAATACATTGCCCATCTCGCTGCAGTCTATAAGAAGTAGCCTACTGCTAGGCTTCAGGAGGTCTATGAATATAAATCTTTGGAGCGAGATAACAGAATTGTTGTACAAGGATGGACGTTATTGCCAGGAGCCTCGAGGACCGACGGAAGCTGTTGGCTATTTTCTTTATAACTTGATTGACAGCATGAGTGACTCAGAGGTACAGGCCAAGGAGGAGCATTTGAGACAATACTTCCATCAGCTGGAGAAGATGAATGTAAAAATTCCTGAAAATATCTACAGAGGCATTCGTAATCTCCTGGAAAGCTACCATGTTCCTGAATTGATTAAGGATGCTCACTTGTTGGTTGAGAGTAAGAATTTAGACTTTCAAAAAACTGTGCAACTTACATCATCTGAATTGGAGTCCACACTTGAAACACTAAAAGCTGAAAATCAACCTATAAGAGATGTCCTAAAGCAACTCATATTAGTGCTTTGTTCAGAAGAGAATATGCAAAAAGCCCTTGAATTGAAAGCAAAATATGAATCCGACATGGTTACTGGTGGCTATGCAGCTTTAATAAATTTATGCTGTCGACATGATAAAGTAGAAGATGCCTTGAACTTGAAAGAAGAATTTGACCGCTTAGATTCATCTGCTGTCCTTGACACCGGCAAGTATGTAGGCCTTGTAAGAGTATTGGCAAAGCATGGCAAGCTCCAAGATGCTATTAACATTCTGAAGGAGATGAAAGAGAAGGATGTTCTTATCAAAGATACAACAGCCTTGTCCTTTTTCCACATGCTAAATGGCGCAGCTTTAAGAGGTGAAATTGAAACAGTAAAACAGTTGCATGAAGCCATCGTGACTCTAGGGTTAGCAGAACCATCCACCAACATAAGTTTCCCATTGGTCACTGTACACTTGGAAAAGGGCGACCTATCTACTGCTCTTGAGGTCGCCATTGACTGCTATGAAAAGTATAAAGTATTACCAAGGATTCATGATGTCTTGTGTAAACTGGTAGAGAAAGGCGAGACTGATCTAATTCAGAAAGCAATGGACTTTGTGAGCCAAGAACAAGGTGAAATGGTGATGCTCTATGATCTCTTCTTTGCCTTCCTACAAACAGGAAATTACAAAGAGGCCAAGAAGATCATTGAGACTCCAGGGATTAGAGCTCGATCTGCAAGGCTTCAGTGGTTTTGTGACAGATGTGTTGCAAATAATCAGGTTGAAACTCTGGAAAAATTAGTGGAGCTGACACAGAAGCTATTTGAATGTGATAGAGACCAGATGTACTACAATCTGCTAAAACTGTATAAAATAAACGGTGACTGGCAAAGAGCTGATGCAGTCTGGAATAAAATCCAAGAAGAAAATGTTATTCCTCGTGAAAAGACATTAAGATTATTAGCAGAAATCCTTAGAGAGGGTAACCAGGAAGTTCCGTTTGACGTACCTGAGAATAACTTTGTTTTAAAGTTGTGGTATGAAGATGAAAAACATTCCCTGAATTCTTCGTCAGCCTCAACCACAGAACCTGATTTCCAGAAAGATATATTGATTGCCTGCCGATTGAACCAAAAAAAAGGGGCATATGATATTTTCCTGAATGCAAAAGAGCAAAACATTGTGTTTAATGCTGAAACCTACAGCAATCTCATTAAATTACTGATGTCAGAAGATTATTTTACACAAGCAATGGAAGTGAAAGCATTCGCGGAGACCCACATCAAGGGCTTCACACTGAACGATGCTGCCAACAGCCGCCTCATCATAACGCAAGTTAGGCGGGATTATTTGAAAGAGGCTGTGACAACACTGAAAACAGTATTGGATCAGCAGCAGACCCCTTCTAGGTTAGCAGTGACCCGTGTCATCCAGGCATTGGCCATGAAGGGTGATGTTGAAAACATAGAAGTAGTTCAGAAGATGTTAAATGGACTCGAAGACTCCATTGGACTTTCAAAAATGGTTTTCATCAATAACATTGCTTTGGCTCAAATAAAGAATAATAACATAGATGCCGCAATAGAAAACATTGAAAATATGCTTACTTCAGAGAATAAAGTCATTGAACCCCAATACTTCGGCTTGGCATACTTATTCAGAAAAGTAATAGAGGAGCAGTTGGAACCAGCAGTTGAAAAGATAAGCATCATGGCGGAGAGATTGGCCAATCAGTTTGCAATTTATAAACCTGTCACTGATTTTTTCCTTCAACTTGTGGATGCAGGCAAGGTGGATGATGCCAGAGCTCTCCTACAGAGATGTGGTGCAATTGCTGAACAAACCCCGATTTTGTTGTTGTTCCTCCTTAGGAATTCTAGGAAACAAGGAAAGGCATCAACTGTGAAATCTGTGTTAGAATTGATTCCTGAATTAAATGAAAAGGAAGAAGCATACAATTCCCTCATGAAAAGCTATGTCTCAGAGAAAGATGTCACATCTGCTAAAGCACTGTATGAACATTTGACTGCAAAGAATACAAAATTGGATGATCTGTTTCTAAAGCGTTACGCATCTTTGCTGAAGTATGCTGGAGAGCCTGTCCCTTTCATTGAACCCCCTGAAAGCTTTGAATTTTATGCACAGCAGCTAAGAAAATTGAGGGAAAACTCTTCTTGA
Amino sequence
MAALLRSARWLLRAGAAPRLPLSLRLLPGGPGRLHAASYLPAARAGPVAGGLLSPARLYAIAAKEKDIQEESTFSSRKISNQFDWALMRLDLSVRRTGRIPKKLLQKVFNDTCRSGGLGGSHALLLLRSCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVTEKLEDVALQILLACPVSKEDGPSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQMHSFPLQFTLHCALLANKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETYTDYVIPCFDSVNSARAILQENGCLSDSDMFSQAGLRSEAANGNLDFVLSFLKSNTLPISLQSIRSSLLLGFRRSMNINLWSEITELLYKDGRYCQEPRGPTEAVGYFLYNLIDSMSDSEVQAKEEHLRQYFHQLEKMNVKIPENIYRGIRNLLESYHVPELIKDAHLLVESKNLDFQKTVQLTSSELESTLETLKAENQPIRDVLKQLILVLCSEENMQKALELKAKYESDMVTGGYAALINLCCRHDKVEDALNLKEEFDRLDSSAVLDTGKYVGLVRVLAKHGKLQDAINILKEMKEKDVLIKDTTALSFFHMLNGAALRGEIETVKQLHEAIVTLGLAEPSTNISFPLVTVHLEKGDLSTALEVAIDCYEKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGEMVMLYDLFFAFLQTGNYKEAKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLFECDRDQMYYNLLKLYKINGDWQRADAVWNKIQEENVIPREKTLRLLAEILREGNQEVPFDVPENNFVLKLWYEDEKHSLNSSSASTTEPDFQKDILIACRLNQKKGAYDIFLNAKEQNIVFNAETYSNLIKLLMSEDYFTQAMEVKAFAETHIKGFTLNDAANSRLIITQVRRDYLKEAVTTLKTVLDQQQTPSRLAVTRVIQALAMKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNNIDAAIENIENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAIYKPVTDFFLQLVDAGKVDDARALLQRCGAIAEQTPILLLFLLRNSRKQGKASTVKSVLELIPELNEKEEAYNSLMKSYVSEKDVTSAKALYEHLTAKNTKLDDLFLKRYASLLKYAGEPVPFIEPPESFEFYAQQLRKLRENSS*