ENST00000261731.4 LHX5

Information
Transcript ID
ENST00000261731.4
Genome
hg38
Position
chr12:113,462,033-113,471,871
Strand
-
CDS length
1,209
Amino acid length
403
Gene symbol
LHX5
Gene type
protein-coding
Gene description
LIM homeobox 5
Gene Entrez Gene ID
64211
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 113,462,033 113,463,557
4 113,467,256 113,467,421
3 113,468,127 113,468,404
2 113,469,122 113,469,345
1 113,471,326 113,471,871
CDS
Exon number Type Start Stop
5 CDS 113,463,190 113,463,557
4 CDS 113,467,256 113,467,421
3 CDS 113,468,127 113,468,404
2 CDS 113,469,122 113,469,345
1 CDS 113,471,326 113,471,498
Other genome
Genome Chromosome Start End Links
hg19 chr12 113,899,838 113,909,676 Link
CDS sequence
ATGATGGTGCACTGCGCCGGTTGCGAGCGGCCCATCCTCGACCGCTTTCTGCTGAACGTGCTGGACCGCGCGTGGCACATCAAATGTGTTCAGTGCTGCGAGTGCAAAACCAACCTCTCGGAGAAGTGCTTCTCGCGCGAGGGCAAGCTCTACTGCAAAAATGACTTTTTCAGGCGCTTTGGCACGAAATGCGCCGGCTGCGCGCAAGGCATCTCGCCCAGCGACCTGGTGCGCAAGGCCCGGAGCAAAGTCTTTCACCTCAACTGTTTCACCTGCATGGTGTGTAACAAGCAGCTGTCCACCGGCGAGGAGCTCTACGTCATCGACGAGAACAAGTTCGTGTGCAAAGACGACTACCTGAGCTCATCCAGCCTCAAGGAGGGCAGCCTCAACTCAGTGTCATCCTGTACGGACCGCAGTTTGTCCCCGGACCTCCAGGACGCACTGCAGGACGACCCCAAAGAGACGGACAACTCGACCTCGTCGGACAAGGAGACGGCCAACAACGAGAACGAGGAGCAGAACTCGGGCACCAAGCGGCGCGGCCCCCGCACCACCATCAAGGCCAAGCAGCTGGAGACGCTCAAGGCTGCCTTCGCCGCCACGCCCAAGCCCACGCGCCACATCCGCGAGCAGCTGGCGCAGGAGACCGGCCTCAACATGCGCGTCATCCAGGTGTGGTTTCAGAACCGACGGTCCAAAGAACGCCGGATGAAACAGCTGAGCGCCCTAGGCGCCCGGAGGCACGCCTTCTTCCGGAGTCCGCGGCGCATGCGTCCGCTGGGCGGCCGCTTGGACGAGTCTGAGATGTTGGGGTCCACCCCGTACACCTACTACGGAGACTACCAAGGCGACTACTACGCGCCGGGAAGCAACTACGACTTCTTCGCGCACGGCCCGCCTTCGCAGGCGCAGTCCCCGGCCGACTCCAGCTTCCTGGCGGCCTCTGGCCCCGGCTCGACGCCGCTGGGAGCGCTGGAACCGCCGCTCGCCGGCCCGCACGCCGCGGACAACCCCAGGTTCACCGACATGATCTCGCACCCGGACACACCGAGCCCCGAGCCAGGCCTGCCGGGCACGCTGCACCCCATGCCCGGCGAGGTATTCAGCGGCGGGCCCAGCCCGCCCTTCCCAATGAGCGGCACCAGCGGCTACAGCGGACCCCTGTCGCATCCCAACCCCGAGCTCAACGAAGCCGCCGTGTGGTAA
Amino sequence
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGPPSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGTLHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW*