ENST00000267260.5 SRRM4
Information
- Transcript ID
- ENST00000267260.5
- Genome
- hg38
- Position
- chr12:118,981,541-119,163,051
- Strand
- +
- CDS length
- 1,836
- Amino acid length
- 612
- Gene symbol
- SRRM4
- Gene type
- protein-coding
- Gene description
- serine/arginine repetitive matrix 4
- Gene Entrez Gene ID
- 84530
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 118,981,541 | 118,982,013 |
| 2 | 119,102,236 | 119,102,382 |
| 3 | 119,114,278 | 119,114,364 |
| 4 | 119,116,937 | 119,117,008 |
| 5 | 119,120,250 | 119,120,276 |
| 6 | 119,122,070 | 119,122,120 |
| 7 | 119,125,381 | 119,125,479 |
| 8 | 119,130,678 | 119,130,834 |
| 9 | 119,145,381 | 119,145,685 |
| 10 | 119,151,017 | 119,151,220 |
| 11 | 119,153,539 | 119,153,649 |
| 12 | 119,154,243 | 119,154,383 |
| 13 | 119,156,495 | 119,163,051 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 118,981,883 | 118,982,013 |
| 2 | CDS | 119,102,236 | 119,102,382 |
| 3 | CDS | 119,114,278 | 119,114,364 |
| 4 | CDS | 119,116,937 | 119,117,008 |
| 5 | CDS | 119,120,250 | 119,120,276 |
| 6 | CDS | 119,122,070 | 119,122,120 |
| 7 | CDS | 119,125,381 | 119,125,479 |
| 8 | CDS | 119,130,678 | 119,130,834 |
| 9 | CDS | 119,145,381 | 119,145,685 |
| 10 | CDS | 119,151,017 | 119,151,220 |
| 11 | CDS | 119,153,539 | 119,153,649 |
| 12 | CDS | 119,154,243 | 119,154,383 |
| 13 | CDS | 119,156,495 | 119,156,798 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 119,419,346 | 119,600,856 | Link |
CDS sequence
ATGGCGAGCGTTCAGCAAGGCGAGAAGCAGCTTTTTGAGAAGTTCTGGCGAGGAACCTTCAAAGCGGTGGCCACCCCCCGTCCCGAGAGCATCATTGTCGCCAGTATCACGGCCCGCAAGCCGCTGCCAAGGACAGAGCCCCAGAATAACCCCGTTGTCCCAGCTCAGGATGGACCCTCAGAAAAGCTGGGTCAGCATCTGGCCACCGAGCCCTTGGGCACCAACAGTTGGGAGAGAGACAAGACCTGTCGGGAACTGGGTGCCACCAGAGGACACAGTGCCTCTCATGACAAAGACTTGACACCACCACCTTCCTCCAGGGGAAAGAAGAAAAAGAAGAAATCCACTCGGAAGAAGAGAAGGAGGTCCTCATCCTATAGCCCATCGCCTGTCAAGAAAAAGAAGAAGAAAAGTTCCAAGAAACACAAGCGACGCAGGTCATTCTCCAAGAAGAGAAGGCACAGCTCCTCTAGCCCAAAAAGCAAAAGAAGAGATGAGAAGAGGCACAAGAAACAATCTCGAAGCCGGCCCCGAAAGTCTCACCGCCACCGCCATCACCGCTGCCCCTCGCGGTCCCAGAGCTCGGAGTCCCGCCCCTCAAGCTGTGAGAGCAGGCACCGCGGCCGGTCCCCTGAGGAAGGGCAGAAGTCCCGCCGAAGGCACTCCCGCCGCTGCTCCAAGACCCTCTGCAAGGACAGCCCTGAGGCCCAGTCCAGTCGCCCGCCCAGTCAACCCCTCCAGATGCTTGGCTACCTGTCAGCCAGGGGTGTAATCACTGGGTCGGGGTCTGCTGCTGACCTCTTTACCAAAACAGCCAGCCCGCTCACCACCTCGCGAGGACGTTCCCAGGAGTACGACTCAGGAAATGACACGTCCTCGCCACCCTCCACGCAAACCAGCTCAGCCAGGTCTCGGGGCCAGGAGAAGGGGAGCCCCAGTGGGGGCTTGAGCAAGAGCCGGGAGCTCAACAGTGGCAACACCTCTGATTCAGGGAACTCCTTCACCACCTCCTCACCCCAGAACAAGGGGGCCATGTTGGAGAATCTCTCCCCCACCAGCAGGGGCAGAGAGTCAAGGGGATTTCAGTCACCGTGTCTGGAATGTGCCGAAGTGAAGAAGTCCAGTTTGGTCCCATCCACAGCCCGGAGCTCACCCATGAAAGGGTGTTCCCGCAGCTCCTCCTATGCCAGCACCCGATCCTCCAGTCACTCGTCCCGATCCCCAAATCCCAGGGCTTCCCCCAGGTACACCCAAAGCCGATCCACCTCTTCTGAAAAAAGGTCCTACTCCCGCTCTCCCAGCTATTCCTCCAAGTCTGGCAAGAGGAGCCCGCCCAGCAGAAGCTCTAGGTCCCGCCGCAGCCCTAGCTACTCCCGCTACAGCCCCAGCAGGGAGCGGGATCCCAAATACAGTGAGAAGGACTCGCAGCAGCGGGAGCGCGAGCGAGCGCGTCGGAGACGTCGGTCCTACTCGCCTATGAGAAAGCGCCGGAGAGACTCCCCGAGCCACCTGGAGGCCCGGAGGATAACCAGTGCCCGGAAACGCCCCATCCCCTACTATCGGCCCAGCCCCTCCTCATCCGGCAGCCTCAGCAGCACCTCCTCCTGGTACAGCAGCAGCAGTAGCCGCTCGGCCAGCCGCAGCTACTCCCGGAGCCGGAGTCGGAGCCGGAGCCGGAGACGGAGCCGGACCCGCACGAGCAGCAGCTCTAGCTCCCGCAGCCCTAGTCCGGGCTCCCGCAGCCGGAGCCGGAGCAGGAGCCGGAGCCGGAGCCGGAGCAGGAGCCAGAGCCGGAGCTACAGCTCAGCAGACAGCTACTCCAGCACGAGGCGCTAA
Amino sequence
MASVQQGEKQLFEKFWRGTFKAVATPRPESIIVASITARKPLPRTEPQNNPVVPAQDGPSEKLGQHLATEPLGTNSWERDKTCRELGATRGHSASHDKDLTPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTLCKDSPEAQSSRPPSQPLQMLGYLSARGVITGSGSAADLFTKTASPLTTSRGRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKSRELNSGNTSDSGNSFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTRR*