ENST00000611581.1 PCDH18

Information
Transcript ID
ENST00000611581.1
Genome
hg38
Position
chr4:137,521,373-137,532,494
Strand
-
CDS length
291
Amino acid length
97
Gene symbol
PCDH18
Gene type
protein-coding
Gene description
protocadherin 18
Gene Entrez Gene ID
54510
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 137,521,373 137,521,701
3 137,528,478 137,528,641
2 137,528,732 137,528,817
1 137,532,255 137,532,494
CDS
Exon number Type Start Stop
4 CDS 137,521,691 137,521,701
3 CDS 137,528,478 137,528,641
2 CDS 137,528,732 137,528,817
1 CDS 137,532,255 137,532,284
Other genome
Genome Chromosome Start End Links
hg19 chr4 138,442,527 138,453,648 Link
CDS sequence
ATGCCGAAGGTATCTGGAAGTCGTGACACGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACAAATATTCCAGGAGCTACAGATATGCCCTTCAAGACATGGACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGGGTGAAGGATTCAGCGACCTGTTTCTCACAGATGGAAGAATTCCAGCAGTGCAGCTATGA
Amino sequence
MPKVSGSRDTVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTDGRIPAVQL*