ENST00000254630.12 PTCD3

Information
Transcript ID
ENST00000254630.12
Genome
hg38
Position
chr2:86,106,235-86,142,157
Strand
+
CDS length
2,070
Amino acid length
690
Gene symbol
PTCD3
Gene type
protein-coding
Gene description
pentatricopeptide repeat domain 3
Gene Entrez Gene ID
55037
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 86,106,235 86,106,351
2 86,108,350 86,108,402
3 86,108,500 86,108,536
4 86,111,113 86,111,158
5 86,116,530 86,116,598
6 86,117,055 86,117,159
7 86,118,921 86,119,044
8 86,121,479 86,121,594
9 86,123,701 86,123,762
10 86,124,995 86,125,082
11 86,125,455 86,125,515
12 86,125,795 86,125,880
13 86,127,161 86,127,305
14 86,127,941 86,127,991
15 86,130,648 86,130,737
16 86,131,078 86,131,106
17 86,132,318 86,132,424
18 86,133,178 86,133,256
19 86,133,346 86,133,436
20 86,134,292 86,134,377
21 86,134,839 86,134,987
22 86,136,521 86,136,562
23 86,136,982 86,137,140
24 86,137,469 86,142,157
CDS
Exon number Type Start Stop
1 CDS 86,106,248 86,106,351
2 CDS 86,108,350 86,108,402
3 CDS 86,108,500 86,108,536
4 CDS 86,111,113 86,111,158
5 CDS 86,116,530 86,116,598
6 CDS 86,117,055 86,117,159
7 CDS 86,118,921 86,119,044
8 CDS 86,121,479 86,121,594
9 CDS 86,123,701 86,123,762
10 CDS 86,124,995 86,125,082
11 CDS 86,125,455 86,125,515
12 CDS 86,125,795 86,125,880
13 CDS 86,127,161 86,127,305
14 CDS 86,127,941 86,127,991
15 CDS 86,130,648 86,130,737
16 CDS 86,131,078 86,131,106
17 CDS 86,132,318 86,132,424
18 CDS 86,133,178 86,133,256
19 CDS 86,133,346 86,133,436
20 CDS 86,134,292 86,134,377
21 CDS 86,134,839 86,134,987
22 CDS 86,136,521 86,136,562
23 CDS 86,136,982 86,137,140
24 CDS 86,137,469 86,137,559
Other genome
Genome Chromosome Start End Links
hg19 chr2 86,333,358 86,369,280 Link
CDS sequence
ATGGCGGTTGTATCTGCTGTTCGCTGGCTGGGCCTCCGCAGCAGGCTTGGCCAGCCGCTGACGGGTCGGCGGGCGGGTTTGTGTGAACAGGCACGCAGCTGCAGATTTTATTCTGGTAGTGCAACCCTCTCAAAGGTTGAAGGAACTGATGTAACAGGGATTGAAGAAGTAGTAATTCCAAAAAAGAAAACTTGGGATAAAGTAGCCGTTCTTCAGGCACTTGCATCCACAGTAAACAGGGATACCACAGCTGTGCCTTATGTGTTTCAAGATGATCCTTACCTTATGCCAGCATCATCTTTGGAATCTCGTTCATTTTTACTGGCAAAGAAATCCGGGGAGAATGTGGCCAAGTTTATTATTAATTCATACCCCAAATATTTTCAGAAGGACATAGCTGAACCTCATATACCGTGTTTAATGCCTGAGTACTTTGAACCTCAGATCAAAGACATAAGTGAAGCCGCCCTGAAGGAACGAATTGAGCTCAGAAAAGTCAAAGCCTCTGTGGACATGTTTGATCAGCTTTTGCAAGCAGGAACCACTGTGTCTCTTGAAACAACAAATAGTCTCTTGGATTTATTGTGTTACTATGGTGACCAGGAGCCCTCAACTGATTACCATTTTCAACAAACTGGACAGTCAGAAGCATTGGAAGAGGAAAATGATGAGACATCTAGGAGGAAAGCTGGTCATCAGTTTGGAGTTACATGGCGAGCAAAAAACAACGCTGAGAGAATCTTTTCTCTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGATCCGAGGAATGGTGAAGCACCGAGCTTATGAGCAGGCATTAAACTTGTACACTGAGTTACTAAACAACAGACTCCATGCTGATGTATACACATTTAATGCATTGATTGAAGCAACAGTATGTGCGATAAATGAGAAATTTGAGGAAAAATGGAGTAAAATACTGGAGCTGCTAAGACACATGGTTGCACAGAAGGTGAAACCAAATCTTCAGACTTTTAATACCATTCTGAAATGTCTCCGAAGATTTCATGTGTTTGCAAGATCGCCAGCCTTACAGGTTTTACGTGAAATGAAAGCCATTGGAATAGAACCCTCGCTTGCAACATATCACCATATTATTCGCCTGTTTGATCAACCTGGAGACCCTTTAAAGAGATCATCCTTCATCATTTATGATATAATGAATGAATTAATGGGAAAGAGATTTTCTCCAAAGGACCCGGATGATGATAAGTTTTTTCAGTCAGCCATGAGCATATGCTCATCTCTCAGAGATCTAGAACTTGCCTACCAAGTACATGGCCTTTTAAAAACCGGAGACAACTGGAAATTCATTGGACCTGATCAACATCGTAATTTCTATTATTCCAAGTTCTTCGATTTGATTTGTCTAATGGAACAAATTGATGTTACCTTGAAGTGGTATGAGGACCTGATACCTTCAGCCTACTTTCCCCACTCCCAAACAATGATACATCTTCTCCAAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCCTAAAATTTGGAAAGATAGTAAAGAATATGGTCATACTTTCCGCAGTGACCTGAGAGAAGAGATCCTGATGCTCATGGCAAGGGACAAGCACCCACCAGAGCTTCAGGTGGCATTTGCTGACTGTGCTGCTGATATCAAATCTGCGTATGAAAGCCAACCCATCAGACAGACTGCTCAGGATTGGCCAGCCACCTCTCTCAACTGTATAGCTATCCTCTTTTTAAGGGCTGGGAGAACTCAGGAAGCCTGGAAAATGTTGGGGCTTTTCAGGAAGCATAATAAGATTCCTAGAAGTGAGTTGCTGAATGAGCTTATGGACAGTGCAAAAGTGTCTAACAGCCCTTCCCAGGCCATTGAAGTAGTAGAGCTGGCAAGTGCCTTCAGCTTACCTATTTGTGAGGGCCTCACCCAGAGAGTAATGAGTGATTTTGCAATCAACCAGGAACAAAAGGAAGCCCTAAGTAATCTAACTGCATTGACCAGTGACAGTGATACTGACAGCAGCAGTGACAGCGACAGTGACACCAGTGAAGGCAAATGA
Amino sequence
MAVVSAVRWLGLRSRLGQPLTGRRAGLCEQARSCRFYSGSATLSKVEGTDVTGIEEVVIPKKKTWDKVAVLQALASTVNRDTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFIINSYPKYFQKDIAEPHIPCLMPEYFEPQIKDISEAALKERIELRKVKASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPSTDYHFQQTGQSEALEEENDETSRRKAGHQFGVTWRAKNNAERIFSLMPEKNEHSYCTMIRGMVKHRAYEQALNLYTELLNNRLHADVYTFNALIEATVCAINEKFEEKWSKILELLRHMVAQKVKPNLQTFNTILKCLRRFHVFARSPALQVLREMKAIGIEPSLATYHHIIRLFDQPGDPLKRSSFIIYDIMNELMGKRFSPKDPDDDKFFQSAMSICSSLRDLELAYQVHGLLKTGDNWKFIGPDQHRNFYYSKFFDLICLMEQIDVTLKWYEDLIPSAYFPHSQTMIHLLQALDVANRLEVIPKIWKDSKEYGHTFRSDLREEILMLMARDKHPPELQVAFADCAADIKSAYESQPIRQTAQDWPATSLNCIAILFLRAGRTQEAWKMLGLFRKHNKIPRSELLNELMDSAKVSNSPSQAIEVVELASAFSLPICEGLTQRVMSDFAINQEQKEALSNLTALTSDSDTDSSSDSDSDTSEGK*