ENST00000389363.5 TM6SF2
Information
- Transcript ID
- ENST00000389363.5
- Genome
- hg38
- Position
- chr19:19,264,366-19,273,301
- Strand
- -
- CDS length
- 1,134
- Amino acid length
- 378
- Gene symbol
- TM6SF2
- Gene type
- protein-coding
- Gene description
- transmembrane 6 superfamily member 2
- Gene Entrez Gene ID
- 53345
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 19,264,366 | 19,264,873 |
| 9 | 19,266,490 | 19,266,609 |
| 8 | 19,267,621 | 19,267,713 |
| 7 | 19,267,986 | 19,268,087 |
| 6 | 19,268,630 | 19,268,754 |
| 5 | 19,269,687 | 19,269,769 |
| 4 | 19,270,173 | 19,270,276 |
| 3 | 19,270,345 | 19,270,442 |
| 2 | 19,271,022 | 19,271,125 |
| 1 | 19,273,121 | 19,273,301 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 19,264,664 | 19,264,873 |
| 9 | CDS | 19,266,490 | 19,266,609 |
| 8 | CDS | 19,267,621 | 19,267,713 |
| 7 | CDS | 19,267,986 | 19,268,087 |
| 6 | CDS | 19,268,630 | 19,268,754 |
| 5 | CDS | 19,269,687 | 19,269,769 |
| 4 | CDS | 19,270,173 | 19,270,276 |
| 3 | CDS | 19,270,345 | 19,270,442 |
| 2 | CDS | 19,271,022 | 19,271,125 |
| 1 | CDS | 19,273,121 | 19,273,215 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 19,375,175 | 19,384,110 | Link |
CDS sequence
ATGGACATCCCGCCGCTGGCCGGCAAGATCGCGGCGCTGTCGCTGAGCGCCCTCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGCTCTCGCACCCCCTGTGGGTGGCATTGATGAGCGCCCTAATCCTGGGTCTGCTTTTCGTGGCGGTCTACAGCTTGTCCCATGGCGAGGTCTCCTATGACCCACTCTATGCTGTCTTCGCTGTCTTCGCCTTCACCTCGGTTGTGGACCTCATCATCGCTCTTCAGGAAGACAGCTATGTGGTGGGCTTCATGGAGTTCTACACCAAGGAGGGAGAGCCATACCTGCGCACAGCGCACGGAGTCTTCATCTGCTACTGGGATGGCACTGTTCACTACCTCCTCTACCTGGCCATGGCCGGCGCCATCTGCAGAAGGAAGAGATACCGGAATTTTGGACTCTACTGGCTGGGTTCCTTCGCCATGAGCATCCTGGTGTTCCTTACAGGAAACATTCTTGGCAAATACAGCTCCGAGATCAGGCCTGCCTTCTTCCTCACCATCCCCTACCTGCTGGTGCCATGCTGGGCTGGCATGAAGGTCTTCAGCCAGCCCCGGGCGCTAACCCGCTGCACCGCCAACATGGTGCAAGAGGAACAAAGAAAGGGACTCCTGCAGCGTCCGGCTGACCTGGCCCTTGTCATATATCTCATCCTTGCTGGCTTCTTCACTCTGTTCCGGGGCCTGGTGGTGCTTGATTGCCCCACAGATGCCTGCTTTGTCTATATCTACCAGTATGAGCCATACCTGCGGGACCCTGTGGCCTACCCTAAGGTGCAGATGCTGATGTACATGTTTTATGTCCTGCCTTTCTGCGGCCTGGCTGCCTATGCTCTCACCTTCCCTGGTTGCTCCTGGCTTCCAGACTGGGCCTTGGTGTTTGCTGGAGGCATCGGCCAGGCACAGTTCTCGCACATGGGGGCTTCCATGCACCTGCGCACACCCTTCACCTACCGTGTGCCTGAGGACACCTGGGGCTGCTTCTTCGTGTGCAATCTGCTGTATGCGCTGGGCCCCCACCTGCTGGCCTACCGTTGCCTTCAGTGGCCCGCATTCTTCCACCAGCCACCACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGA
Amino sequence
MDIPPLAGKIAALSLSALPVSYALNHVSALSHPLWVALMSALILGLLFVAVYSLSHGEVSYDPLYAVFAVFAFTSVVDLIIALQEDSYVVGFMEFYTKEGEPYLRTAHGVFICYWDGTVHYLLYLAMAGAICRRKRYRNFGLYWLGSFAMSILVFLTGNILGKYSSEIRPAFFLTIPYLLVPCWAGMKVFSQPRALTRCTANMVQEEQRKGLLQRPADLALVIYLILAGFFTLFRGLVVLDCPTDACFVYIYQYEPYLRDPVAYPKVQMLMYMFYVLPFCGLAAYALTFPGCSWLPDWALVFAGGIGQAQFSHMGASMHLRTPFTYRVPEDTWGCFFVCNLLYALGPHLLAYRCLQWPAFFHQPPPSDPLALHKKQH*