ENST00000473667.6 PDZD11
Information
- Transcript ID
- ENST00000473667.6
- Genome
- hg38
- Position
- chrX:70,286,595-70,289,913
- Strand
- -
- CDS length
- 423
- Amino acid length
- 141
- Gene symbol
- PDZD11
- Gene type
- protein-coding
- Gene description
- PDZ domain containing 11
- Gene Entrez Gene ID
- 51248
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 70,286,595 | 70,287,116 |
| 6 | 70,287,276 | 70,287,336 |
| 5 | 70,287,732 | 70,287,830 |
| 4 | 70,288,117 | 70,288,173 |
| 3 | 70,288,430 | 70,288,513 |
| 2 | 70,289,255 | 70,289,593 |
| 1 | 70,289,860 | 70,289,913 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 70,287,082 | 70,287,116 |
| 6 | CDS | 70,287,276 | 70,287,336 |
| 5 | CDS | 70,287,732 | 70,287,830 |
| 4 | CDS | 70,288,117 | 70,288,173 |
| 3 | CDS | 70,288,430 | 70,288,513 |
| 2 | CDS | 70,289,255 | 70,289,341 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 69,506,445 | 69,509,763 | Link |
CDS sequence
ATGGACAGCCGGATTCCTTATGATGACTACCCGGTGGTTTTCTTGCCTGCCTATGAGAATCCTCCAGCATGGATTCCTCCTCATGAGAGGGTACACCACCCGGACTACAACAATGAGTTGACCCAGTTTCTGCCCCGAACCATCACACTGAAGAAGCCTCCTGGAGCTCAGTTGGGATTTAACATCCGAGGAGGAAAGGCCTCCCAGCTAGGCATCTTCATCTCCAAGGTGATTCCTGACTCTGATGCACATAGAGCAGGACTGCAGGAAGGGGACCAAGTTCTAGCTGTGAATGATGTGGATTTCCAAGATATTGAGCACAGCAAGGCTGTTGAGATCCTGAAGACAGCTCGTGAAATCAGCATGCGTGTGCGCTTCTTTCCCTACAATTATCATCGCCAAAAAGAGAGGACTGTGCACTAG
Amino sequence
MDSRIPYDDYPVVFLPAYENPPAWIPPHERVHHPDYNNELTQFLPRTITLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTAREISMRVRFFPYNYHRQKERTVH*