ENST00000587541.5 MADCAM1

Information
Transcript ID
ENST00000587541.5
Genome
hg38
Position
chr19:489,176-505,342
Strand
+
CDS length
492
Amino acid length
164
Gene symbol
MADCAM1
Gene type
protein-coding
Gene description
mucosal vascular addressin cell adhesion molecule 1
Gene Entrez Gene ID
8174
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 489,176 490,039
2 501,669 501,929
3 504,745 505,342
CDS
Exon number Type Start Stop
1 CDS 490,030 490,039
2 CDS 501,669 501,929
3 CDS 504,745 504,965
Other genome
Genome Chromosome Start End Links
hg19 chr19 489,176 505,342 Link
CDS sequence
ATGGGTGGTATCCTGCACAGCCCGACCTCCCCGGAGCCTCCCGACACCACCTCCCCGGAGTCTCCCGACACCACCTCCCCGGAGTCTCCCGACACCACCTCCCAGGAGCCTCCCGACACCACCTCCCCGGAGCCTCCCGACAAGACCTCCCCGGAGCCCGCCCCCCAGCAGGGCTCCACACACACCCCCAGGAGCCCAGGCTCCACCAGGACTCGCCGCCCTGAGATCTCCCAGGCTGGGCCCACGCAGGGAGAAGTGATCCCAACAGGCTCGTCCAAACCTGCGGGTGACCAGCTGCCCGCGGCTCTGTGGACCAGCAGTGCGGTGCTGGGACTGCTGCTCCTGGCCTTGCCCACCTATCACCTCTGGAAACGCTGCCGGCACCTGGCTGAGGACGACACCCACCCACCAGCTTCTCTGAGGCTTCTGCCCCAGGTGTCGGCCTGGGCTGGGTTAAGGGGGACCGGCCAGGTCGGGATCAGCCCCTCCTGA
Amino sequence
MGGILHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPAGDQLPAALWTSSAVLGLLLLALPTYHLWKRCRHLAEDDTHPPASLRLLPQVSAWAGLRGTGQVGISPS*