ENST00000389554.8 TBR1

Information
Transcript ID
ENST00000389554.8
Genome
hg38
Position
chr2:161,416,297-161,425,870
Strand
+
CDS length
2,049
Amino acid length
683
Gene symbol
TBR1
Gene type
protein-coding
Gene description
T-box brain transcription factor 1
Gene Entrez Gene ID
10716
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 161,416,297 161,417,102
2 161,417,676 161,417,830
3 161,418,201 161,418,322
4 161,418,892 161,419,050
5 161,420,196 161,420,257
6 161,423,369 161,425,870
CDS
Exon number Type Start Stop
1 CDS 161,416,411 161,417,102
2 CDS 161,417,676 161,417,830
3 CDS 161,418,201 161,418,322
4 CDS 161,418,892 161,419,050
5 CDS 161,420,196 161,420,257
6 CDS 161,423,369 161,424,227
Other genome
Genome Chromosome Start End Links
hg19 chr2 162,272,808 162,282,381 Link
CDS sequence
ATGCAGCTGGAGCACTGCCTTTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCTACCCACATTCAGGCGGATCCGAGCTTGTCTTGCACGATCATCCCATTATCTCGACCACTGACAACCTGGAGAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTCGTCACAGTTTCGATGGCTCTGCTGCAGATCGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCGTACCCCGGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGCAGCCCTAGCCGCTACATGGCCCACCACCCGGTCATCACCAACGGAGCCTACAACAGCCTCCTGTCCAACTCCTCGCCGCAGGGATACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGCTCCGTTCTACCAGTTCTCCTCCACCCAGCCGGGGCTGGTGCCCGGCAAAGCACAGGTGTACCTGTGCAACAGGCCCCTTTGGCTGAAATTTCACCGGCACCAAACGGAGATGATCATCACCAAACAGGGAAGGCGCATGTTTCCTTTTTTAAGTTTTAACATTTCTGGTCTCGATCCCACGGCTCATTACAATATTTTTGTGGATGTGATTTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGCGGCAAAGCGGACACCAATGTGCAAGGAAATCGGGTCTATATGCATCCGGATTCCCCCAACACTGGGGCTCACTGGATGCGCCAAGAAATCTCTTTTGGAAAATTAAAACTTACGAACAACAAAGGAGCTTCAAATAACAATGGGCAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGCATGTGGTGGAAGTGAACGAGGACGGCACGGAGGACACTAGCCAGCCCGGCCGCGTGCAGACGTTCACTTTCCCTGAGACTCAGTTCATCGCCGTCACCGCCTACCAGAACACGGATATTACACAACTGAAAATAGATCACAACCCTTTTGCAAAAGGATTTCGGGATAATTATGACACGATCTACACCGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAGGACCAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGCCCCGGGCCGGGTACGGACCGCAGCGTGCCGCACACCAACGGGCTGCTGTCGCCGCAGCAGGCCGAGGACCCGGGCGCGCCCTCGCCGCAACGCTGGTTTGTGACGCCGGCCAACAACCGGCTGGACTTCGCGGCCTCGGCCTATGACACGGCCACGGACTTCGCGGGCAACGCGGCCACGCTGCTCTCTTACGCGGCGGCGGGCGTGAAGGCGCTGCCGCTGCAGGCTGCAGGCTGCACTGGCCGCCCGCTCGGCTACTACGCCGACCCGTCGGGCTGGGGCGCCCGCAGTCCCCCGCAGTACTGCGGCACCAAGTCGGGCTCGGTGCTGCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAATCCCTACCTGGGCGAGGAGGCCGAGGGCCTGGCCGCCGAGCGCTCGCCGCTGCCGCCCGGCGCCGCCGAGGACGCCAAGCCCAAGGACCTGTCCGATTCCAGCTGGATCGAGACGCCCTCCTCGATCAAGTCCATCGACTCCAGCGACTCGGGGATTTACGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCCGACACGCCCGTGTCCGAGAGTTCGTCCCCGCTCAAGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATTAGCGGCTACTATGGCTTCTACTCGCACAGCTAG
Amino sequence
MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAPSAMFPYPGQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGTKSGSVLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLPPGAAEDAKPKDLSDSSWIETPSSIKSIDSSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDISGYYGFYSHS*