ENST00000347471.8 SMARCC2

Information
Transcript ID
ENST00000347471.8
Genome
hg38
Position
chr12:56,163,330-56,189,548
Strand
-
CDS length
3,393
Amino acid length
1,131
Gene symbol
SMARCC2
Gene type
protein-coding
Gene description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
Gene Entrez Gene ID
6601
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
29 56,163,330 56,163,765
28 56,164,648 56,164,731
27 56,165,318 56,165,699
26 56,168,060 56,168,194
25 56,169,529 56,169,695
24 56,169,776 56,169,911
23 56,170,144 56,170,208
22 56,171,271 56,171,432
21 56,171,679 56,171,937
20 56,172,428 56,172,490
19 56,172,585 56,172,704
18 56,172,937 56,173,029
17 56,173,696 56,173,849
16 56,174,651 56,174,764
15 56,178,022 56,178,093
14 56,178,404 56,178,534
13 56,178,810 56,178,847
12 56,178,997 56,179,056
11 56,180,977 56,181,101
10 56,181,482 56,181,597
9 56,181,704 56,181,835
8 56,182,004 56,182,079
7 56,183,861 56,183,930
6 56,184,175 56,184,244
5 56,184,844 56,184,936
4 56,185,030 56,185,111
3 56,186,155 56,186,240
2 56,187,187 56,187,306
1 56,189,351 56,189,548
CDS
Exon number Type Start Stop
29 CDS 56,163,689 56,163,765
28 CDS 56,164,648 56,164,731
27 CDS 56,165,318 56,165,699
26 CDS 56,168,060 56,168,194
25 CDS 56,169,529 56,169,695
24 CDS 56,169,776 56,169,911
23 CDS 56,170,144 56,170,208
22 CDS 56,171,271 56,171,432
21 CDS 56,171,679 56,171,937
20 CDS 56,172,428 56,172,490
19 CDS 56,172,585 56,172,704
18 CDS 56,172,937 56,173,029
17 CDS 56,173,696 56,173,849
16 CDS 56,174,651 56,174,764
15 CDS 56,178,022 56,178,093
14 CDS 56,178,404 56,178,534
13 CDS 56,178,810 56,178,847
12 CDS 56,178,997 56,179,056
11 CDS 56,180,977 56,181,101
10 CDS 56,181,482 56,181,597
9 CDS 56,181,704 56,181,835
8 CDS 56,182,004 56,182,079
7 CDS 56,183,861 56,183,930
6 CDS 56,184,175 56,184,244
5 CDS 56,184,844 56,184,936
4 CDS 56,185,030 56,185,111
3 CDS 56,186,155 56,186,240
2 CDS 56,187,187 56,187,306
1 CDS 56,189,351 56,189,461
Other genome
Genome Chromosome Start End Links
hg19 chr12 56,557,114 56,583,332 Link
CDS sequence
ATGGCGGTGCGGAAGAAGGACGGCGGCCCCAACGTGAAGTACTACGAGGCCGCGGACACCGTGACCCAGTTCGACAACGTGCGGCTGTGGCTCGGCAAGAACTACAAGAAGTATATACAAGCTGAACCACCCACCAACAAGTCCCTGTCTAGCCTGGTTGTACAGTTGCTACAATTTCAGGAAGAAGTTTTTGGCAAACATGTCAGCAATGCACCGCTCACTAAACTGCCGATCAAATGTTTCCTAGATTTCAAAGCGGGAGGCTCCTTGTGCCACATTCTTGCAGCTGCCTACAAATTCAAGAGTGACCAGGGATGGCGGCGTTACGATTTCCAGAATCCATCACGCATGGACCGCAATGTGGAAATGTTTATGACCATTGAGAAGTCCTTGGTGCAGAATAATTGCCTGTCTCGACCTAACATTTTTCTGTGCCCAGAAATTGAGCCCAAACTACTAGGGAAATTAAAGGACATTATCAAGAGACACCAGGGAACAGTCACTGAGGATAAGAACAATGCCTCCCATGTTGTGTATCCTGTCCCGGGGAATCTAGAAGAAGAGGAATGGGTACGACCAGTCATGAAGAGGGATAAGCAGGTTCTTCTGCACTGGGGCTACTATCCTGACAGTTACGACACGTGGATCCCAGCGAGTGAAATTGAGGCATCTGTGGAAGATGCTCCAACTCCTGAGAAACCTAGGAAGGTTCATGCAAAGTGGATCCTGGACACCGACACCTTCAATGAATGGATGAATGAGGAAGACTATGAAGTAAATGATGACAAAAACCCTGTCTCCCGCCGAAAGAAGATTTCAGCCAAGACACTGACAGATGAGGTGAACAGCCCAGATTCAGATCGACGGGACAAGAAGGGGGGAAACTATAAGAAGAGGAAGCGCTCCCCCTCTCCTTCACCAACCCCAGAAGCAAAGAAGAAAAATGCTAAGAAAGGTCCCTCAACACCTTACACTAAGTCAAAGCGTGGCCACAGAGAAGAGGAGCAAGAAGACCTGACAAAGGACATGGACGAGCCCTCACCAGTCCCCAATGTAGAAGAGGTGACACTTCCCAAAACAGTCAACACAAAGAAAGACTCAGAGTCGGCCCCAGTCAAAGGCGGCACCATGACCGACCTGGATGAACAGGAAGATGAAAGCATGGAGACGACGGGCAAGGATGAGGATGAGAACAGTACGGGGAACAAGGGAGAGCAGACCAAGAATCCAGACCTGCATGAGGACAATGTGACTGAACAGACCCACCACATCATCATTCCCAGCTACGCTGCCTGGTTTGACTACAATAGTGTTCATGCCATTGAGCGGAGGGCTCTCCCCGAGTTCTTCAACGGCAAGAACAAGTCCAAGACTCCAGAGATCTACCTGGCCTATCGAAACTTTATGATTGACACTTACCGACTGAACCCCCAAGAGTATCTTACCTCTACCGCCTGCCGCCGAAACCTAGCGGGTGATGTCTGTGCCATCATGAGGGTCCATGCCTTCCTAGAACAGTGGGGTCTTATTAACTACCAGGTGGATGCTGAGAGTCGACCAACCCCAATGGGGCCTCCGCCTACCTCTCACTTCCATGTCTTGGCTGACACACCATCAGGGCTGGTGCCTCTGCAGCCCAAGACACCTCAGGGCCGCCAGGTTGATGCTGATACCAAGGCTGGGCGAAAGGGCAAAGAGCTGGATGACCTGGTGCCAGAGACGGCTAAGGGCAAGCCAGAGCTGCAGACCTCTGCTTCCCAACAAATGCTCAACTTTCCTGACAAAGGCAAAGAGAAACCAACAGACATGCAAAACTTTGGGCTGCGCACAGACATGTACACAAAAAAGAATGTTCCCTCCAAGAGCAAGGCTGCAGCCAGTGCCACTCGTGAGTGGACAGAACAGGAAACCCTGCTTCTCCTGGAGGCACTGGAAATGTACAAAGATGACTGGAACAAAGTGTCCGAGCATGTGGGAAGCCGCACACAGGACGAGTGCATCTTGCATTTTCTTCGTCTTCCCATTGAAGACCCATACCTGGAGGACTCAGAGGCCTCCCTAGGCCCCCTGGCCTACCAACCCATCCCCTTCAGTCAGTCGGGCAACCCTGTTATGAGCACTGTTGCCTTCCTGGCCTCTGTCGTCGATCCCCGAGTCGCCTCTGCTGCTGCAAAGTCAGCCCTAGAGGAGTTCTCCAAAATGAAGGAAGAGGTACCCACGGCCTTGGTGGAGGCCCATGTTCGAAAAGTGGAAGAAGCAGCCAAAGTAACAGGCAAGGCGGACCCTGCCTTCGGTCTGGAAAGCAGTGGCATTGCAGGAACCACCTCTGATGAGCCTGAGCGGATTGAGGAGAGCGGGAATGACGAGGCTCGGGTGGAAGGCCAGGCCACAGATGAGAAGAAGGAGCCCAAGGAACCCCGAGAAGGAGGGGGTGCTATAGAGGAGGAAGCAAAAGAGAAAACCAGCGAGGCTCCCAAGAAGGATGAGGAGAAAGGGAAAGAAGGCGACAGTGAGAAGGAGTCCGAGAAGAGTGATGGAGACCCAATAGTCGATCCTGAGAAGGAGAAGGAGCCAAAGGAAGGGCAGGAGGAAGTGCTGAAGGAAGTGGTGGAGTCTGAGGGGGAAAGGAAGACAAAGGTGGAGCGGGACATTGGCGAGGGCAACCTCTCCACCGCTGCTGCCGCCGCCCTGGCCGCCGCCGCAGTGAAAGCTAAGCACTTGGCTGCTGTTGAGGAAAGGAAGATCAAATCTTTGGTGGCCCTGCTGGTGGAGACCCAGATGAAAAAGTTGGAGATCAAACTTCGGCACTTTGAGGAGCTGGAGACTATCATGGACCGGGAGCGAGAAGCACTGGAGTATCAGAGGCAGCAGCTCCTGGCCGACAGACAAGCCTTCCACATGGAGCAGCTGAAGTATGCGGAGATGAGGGCTCGGCAGCAGCACTTCCAACAGATGCACCAACAGCAGCAGCAGCCACCACCAGCCCTGCCCCCAGGCTCCCAGCCTATCCCCCCAACAGGGGCTGCTGGGCCACCCGCAGTCCATGGCTTGGCTGTGGCTCCAGCCTCTGTAGTCCCTGCTCCTGCTGGCAGTGGGGCCCCTCCAGGAAGTTTGGGCCCTTCTGAACAGATTGGGCAGGCAGGGTCAACTGCAGGGCCACAGCAGCAGCAACCAGCTGGAGCCCCCCAGCCTGGGGCAGTCCCACCAGGGGTTCCCCCCCCTGGACCCCATGGCCCCTCACCGTTCCCCAACCAACAAACTCCTCCCTCAATGATGCCAGGGGCAGTGCCAGGCAGCGGGCACCCAGGCGTGGCGGACCCAGGCACCCCCCTGCCTCCAGACCCCACAGCCCCGAGCCCAGGCACGGTCACCCCTGTGCCACCTCCACAGTGA
Amino sequence
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ*