ENST00000579795.6 FOXN1

Information
Transcript ID
ENST00000579795.6
Genome
hg38
Position
chr17:28,506,348-28,538,900
Strand
+
CDS length
1,947
Amino acid length
649
Gene symbol
FOXN1
Gene type
protein-coding
Gene description
forkhead box N1
Gene Entrez Gene ID
8456
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,506,348 28,506,443
2 28,523,956 28,524,092
3 28,524,503 28,524,967
4 28,527,251 28,527,361
5 28,529,094 28,529,224
6 28,530,749 28,530,845
7 28,534,331 28,534,538
8 28,534,707 28,535,198
9 28,537,117 28,538,900
CDS
Exon number Type Start Stop
2 CDS 28,523,970 28,524,092
3 CDS 28,524,503 28,524,967
4 CDS 28,527,251 28,527,361
5 CDS 28,529,094 28,529,224
6 CDS 28,530,749 28,530,845
7 CDS 28,534,331 28,534,538
8 CDS 28,534,707 28,535,198
9 CDS 28,537,117 28,537,436
Other genome
Genome Chromosome Start End Links
hg19 chr17 26,833,366 26,865,918 Link
CDS sequence
ATGGTGTCGCTACCCCCGCCGCAGTCTGACGTCACGCTGCCGGGCCCCACCAGACTGGAGGGCGAGCGCCAAGGGGACCTCATGCAGGCACCGGGCCTCCCAGGCTCCCCTGCCCCACAGAGTAAGCATGCCGGCTTCAGCTGCTCGTCATTTGTGTCCGACGGCCCTCCAGAGAGGACACCCTCACTGCCCCCACACAGCCCCCGCATTGCGTCACCAGGGCCCGAGCAAGTCCAGGGCCACTGCCCAGCCGGCCCCGGCCCTGGGCCCTTCAGGCTCTCACCCTCAGACAAGTATCCTGGCTTTGGCTTTGAGGAGGCCGCAGCAAGCAGCCCTGGGCGATTCCTCAAGGGCAGCCACGCGCCCTTCCACCCGTACAAGCGGCCTTTCCATGAGGACGTCTTCCCAGAGGCCGAGACCACCCTGGCCCTCAAAGGACACTCCTTTAAGACCCCAGGGCCGCTGGAGGCCTTCGAGGAGATCCCAGTGGACGTGGCGGAGGCCGAGGCCTTCCTGCCTGGCTTCTCAGCAGAGGCCTGGTGTAACGGGCTCCCCTACCCCAGCCAGGAGCATGGCCCCCAAGTCCTGGGTTCAGAGGTCAAAGTCAAGCCCCCAGTTCTGGAGAGTGGTGCTGGGATGTTCTGCTACCAGCCTCCCTTGCAGCATATGTACTGCTCCTCCCAGCCCCCCTTCCACCAGTACTCGCCAGGTGGTGGCAGCTACCCCATACCCTACCTGGGCTCCTCACACTATCAGTACCAGCGAATGGCACCCCAGGCCAGCACCGATGGGCACCAGCCTCTCTTCCCAAAACCCATCTATTCCTACAGCATCCTCATCTTCATGGCCCTTAAGAACAGTAAAACTGGGAGCCTTCCCGTCAGCGAGATCTACAATTTTATGACGGAGCACTTTCCTTACTTCAAGACAGCACCCGATGGCTGGAAGAATTCTGTCCGGCACAACCTATCCCTCAACAAGTGCTTCGAGAAGGTGGAGAACAAATCAGGAAGTTCCTCCCGCAAGGGCTGCCTGTGGGCCCTCAATCCGGCCAAGATCGACAAGATGCAAGAGGAGCTGCAAAAATGGAAGAGGAAAGATCCCATTGCTGTGCGCAAAAGCATGGCCAAGCCAGAAGAGCTGGACAGCCTCATTGGAGACAAGAGAGAAAAGCTGGGCTCCCCACTCCTGGGCTGTCCGCCCCCTGGGCTGTCCGGCTCAGGCCCCATCCGGCCCCTGGCACCCCCAGCTGGCCTCTCCCCACCACTGCACTCACTCCACCCAGCTCCAGGCCCCATTCCTGGCAAGAACCCCCTGCAGGACCTACTTATGGGGCACACACCCTCCTGCTATGGGCAGACATACTTGCACCTCTCACCAGGCCTGGCCCCTCCTGGACCCCCGCAGCCATTGTTCCCACAGCCGGACGGGCACCTTGAGCTGCGGGCCCAGCCAGGCACCCCCCAGGACTCGCCTCTGCCTGCCCACACCCCACCCAGCCACAGTGCCAAGCTACTGGCCGAGCCTTCCCCAGCCAGGACTATGCACGACACCCTGCTGCCAGATGGAGACCTTGGCACTGACCTGGATGCCATCAATCCCTCACTCACTGACTTCGACTTCCAGGGAAACCTGTGGGAACAGTTGAAGGATGATAGCTTGGCCCTCGACCCCCTGGTACTGGTGACCTCATCCCCGACATCATCTTCGATGCCACCACCCCAGCCACCACCTCACTGCTTCCCCCCTGGGCCCTGTCTGACAGAGACAGGCAGTGGGGCAGGTGACTTGGCAGCCCCGGGCAGTGGTGGCTCCGGGGCACTGGGTGACCTGCACCTCACCACCCTCTACTCTGCCTTTATGGAGCTGGAGCCCACGCCCCCCACGGCCCCTGCAGGCCCCTCTGTGTACCTCAGCCCCAGCTCCAAGCCCGTGGCCCTGGCATGA
Amino sequence
MVSLPPPQSDVTLPGPTRLEGERQGDLMQAPGLPGSPAPQSKHAGFSCSSFVSDGPPERTPSLPPHSPRIASPGPEQVQGHCPAGPGPGPFRLSPSDKYPGFGFEEAAASSPGRFLKGSHAPFHPYKRPFHEDVFPEAETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLGSEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFHQYSPGGGSYPIPYLGSSHYQYQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLMGHTPSCYGQTYLHLSPGLAPPGPPQPLFPQPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAEPSPARTMHDTLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTSSSMPPPQPPPHCFPPGPCLTETGSGAGDLAAPGSGGSGALGDLHLTTLYSAFMELEPTPPTAPAGPSVYLSPSSKPVALA*