ENST00000359541.6 GTF3C2

Information
Transcript ID
ENST00000359541.6
Genome
hg38
Position
chr2:27,325,849-27,356,492
Strand
-
CDS length
2,736
Amino acid length
912
Gene symbol
GTF3C2
Gene type
protein-coding
Gene description
general transcription factor IIIC subunit 2
Gene Entrez Gene ID
2976
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
19 27,325,849 27,326,893
18 27,327,177 27,327,284
17 27,328,037 27,328,189
16 27,328,468 27,328,596
15 27,328,844 27,328,931
14 27,329,121 27,329,282
13 27,329,379 27,329,523
12 27,333,655 27,333,784
11 27,333,974 27,333,999
10 27,335,598 27,335,706
9 27,335,917 27,336,028
8 27,336,198 27,336,425
7 27,337,244 27,337,342
6 27,337,481 27,337,558
5 27,337,926 27,338,020
4 27,341,948 27,342,233
3 27,342,826 27,343,147
2 27,343,308 27,343,578
1 27,356,087 27,356,492
CDS
Exon number Type Start Stop
19 CDS 27,326,675 27,326,893
18 CDS 27,327,177 27,327,284
17 CDS 27,328,037 27,328,189
16 CDS 27,328,468 27,328,596
15 CDS 27,328,844 27,328,931
14 CDS 27,329,121 27,329,282
13 CDS 27,329,379 27,329,523
12 CDS 27,333,655 27,333,784
11 CDS 27,333,974 27,333,999
10 CDS 27,335,598 27,335,706
9 CDS 27,335,917 27,336,028
8 CDS 27,336,198 27,336,425
7 CDS 27,337,244 27,337,342
6 CDS 27,337,481 27,337,558
5 CDS 27,337,926 27,338,020
4 CDS 27,341,948 27,342,233
3 CDS 27,342,826 27,343,147
2 CDS 27,343,308 27,343,554
Other genome
Genome Chromosome Start End Links
hg19 chr2 27,548,716 27,579,359 Link
CDS sequence
ATGGATACCTGCGGGGTCGGCTATGTTGCCCTGGGGGAGGCCGGCCCCGTGGGGAACATGACTGTGGTAGACTCTCCTGGACAAGAGGTGCTAAATCAGCTTGATGTCAAGACCTCTTCAGAAATGACCAGTGCAGAGGCTTCCGTAGAGATGTCATTACCTACCCCTTTGCCTGGATTTGAGGATTCTCCTGATCAGAGGAGGCTCCCTCCAGAGCAGGAAAGCCTCTCCAGACTGGAACAGCCAGATCTTTCTTCAGAGATGTCAAAGGTCTCAAAGCCTAGGGCCTCAAAGCCTGGCCGGAAGAGAGGTGGTAGGACACGAAAAGGCCCCAAAAGGCCCCAACAGCCTAATCCTCCATCAGCCCCACTGGTTCCTGGTCTCTTAGATCAATCCAACCCTCTGTCCACCCCCATGCCTAAGAAACGAGGTCGAAAGTCCAAGGCAGAGCTGCTGCTGCTGAAGTTGTCAAAAGACCTAGATCGGCCAGAATCTCAATCTCCAAAGAGGCCCCCTGAGGACTTTGAGACCCCTTCTGGGGAACGACCCCGCCGAAGGGCTGCCCAAGTGGCACTTCTGTATCTTCAGGAACTGGCTGAAGAGCTCTCAACAGCCCTGCCTGCCCCTGTGTCCTGTCCTGAGGGCCCCAAGGTGAGCAGCCCCACCAAACCGAAGAAGATCCGGCAGCCAGCAGCCTGTCCAGGTGGAGAAGAGGTGGATGGTGCTCCACGGGATGAAGACTTTTTTCTCCAGGTTGAGGCTGAAGATGTGGAAGAAAGTGAGGGCCCAAGTGAGAGCTCATCTGAACCTGAGCCTGTAGTGCCCCGAAGCACCCCACGAGGATCTACTTCAGGGAAACAGAAACCACACTGCCGAGGAATGGCTCCCAATGGCTTACCAAATCATATCATGGCTCCTGTTTGGAAGTGCCTCCATCTCACCAAGGACTTCCGAGAGCAGAAACATTCATACTGGGAGTTTGCTGAGTGGATTCCTTTAGCCTGGAAGTGGCACTTGTTATCTGAGCTTGAGGCCGCTCCCTACCTGCCCCAGGAGGAGAAGTCTCCATTGTTTTCTGTACAACGTGAAGGGCTACCTGAAGATGGCACCCTCTACCGAATAAACAGATTTAGCTCGATCACAGCACATCCAGAGCGCTGGGATGTGTCCTTCTTCACGGGGGGACCGCTCTGGGCTCTGGACTGGTGCCCAGTGCCAGAGGGGGCAGGAGCCTCGCAATATGTGGCTCTTTTCTCCAGCCCTGACATGAATGAGACACACCCACTGAGCCAGCTTCATTCGGGTCCTGGGCTGCTCCAGCTCTGGGGCCTTGGGACCTTGCAGCAAGAAAGCTGTCCTGGCAACAGGGCCCACTTTGTCTATGGGATTGCTTGTGACAACGGCTGCATCTGGGACCTCAAGTTCTGCCCCAGTGGAGCATGGGAACTTCCAGGCACCCCTCGGAAGGCTCCTCTCCTGCCCCGGTTGGGTCTCTTGGCTCTGGCCTGCTCAGACGGGAAAGTACTGCTATTCAGTCTACCCCATCCGGAGGCCCTGCTGGCTCAGCAACCCCCAGATGCAGTGAAGCCTGCCATATATAAGGTACAATGTGTGGCAACTCTGCAGGTGGGGTCTATGCAAGCTACAGACCCCTCTGAGTGTGGTCAGTGCCTTAGCCTGGCCTGGATGCCTACCAGGCCCCACCAACACCTAGCTGCTGGATATTATAATGGCATGGTGGTTTTCTGGAACCTTCCCACTAACTCACCCCTGCAGCGGATACGGCTCTCTGATGGCTCCTTAAAGCTCTACCCCTTCCAGTGTTTCCTAGCCCATGACCAGGCTGTGCGTACCCTTCAATGGTGCAAAGCTAACAGCCATTTCCTTGTCTCTGCGGGGAGTGACCGGAAAATCAAATTCTGGGACCTTCGACGTCCTTACGAACCCATAAACTCTATCAAGCGCTTCTTGAGTACAGAACTGGCCTGGCTGCTTCCCTACAATGGTGTCACTGTGGCTCAGGACAACTGCTATGCCTCTTATGGACTCTGTGGGATTCATTATATTGACGCTGGTTACCTTGGTTTCAAGGCCTACTTCACTGCTCCTCGAAAAGGCACCGTTTGGAGTCTTTCAGGATCCGACTGGCTTGGGACAATAGCTGCAGGAGATATATCCGGGGAGCTCATTGCTGCTATATTACCAGATATGGCACTGAATCCAATAAATGTCAAGCGACCTGTAGAGCGAAGATTTCCTATATATAAAGCAGATCTGATACCGTATCAGGACAGTCCTGAAGGTCCAGACCATTCTTCTGCTTCATCTGGGGTCCCCAACCCTCCTAAGGCTCGAACTTACACTGAAACTGTCAACCATCACTACTTGCTCTTTCAAGACACAGATTTGGGTTCATTCCATGATCTGCTCCGTAGAGAACCAATGCTGCGCATGCAGGAGGGAGAGGGGCATTCTCAACTCTGCCTGGACAGGCTGCAGCTGGAGGCTATTCATAAGGTACGTTTCAGCCCAAACCTGGACTCCTATGGATGGCTGGTATCTGGGGGGCAGTCAGGGCTGGTTCGAATCCATTTTGTCCGTGGACTCGCCTCCCCACTGGGCCACCGTATGCAGCTTGAAAGCCGAGCCCACTTCAATGCTATGTTCCAACCATCCTCCCCCACTAGACGGCCTGGCTTCTCTCCAACCAGCCATCGCCTTCTGCCCACTCCCTAG
Amino sequence
MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKPHCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP*