ENST00000552857.5 TARBP2
Information
- Transcript ID
- ENST00000552857.5
- Genome
- hg38
- Position
- chr12:53,501,274-53,506,229
- Strand
- +
- CDS length
- 498
- Amino acid length
- 166
- Gene symbol
- TARBP2
- Gene type
- protein-coding
- Gene description
- TARBP2 subunit of RISC loading complex
- Gene Entrez Gene ID
- 6895
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 53,501,274 | 53,501,461 |
| 2 | 53,503,713 | 53,503,808 |
| 3 | 53,504,397 | 53,504,469 |
| 4 | 53,504,698 | 53,504,815 |
| 5 | 53,505,649 | 53,505,850 |
| 6 | 53,505,991 | 53,506,229 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 53,501,409 | 53,501,461 |
| 2 | CDS | 53,503,713 | 53,503,808 |
| 3 | CDS | 53,504,397 | 53,504,469 |
| 4 | CDS | 53,504,698 | 53,504,815 |
| 5 | CDS | 53,505,649 | 53,505,806 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 53,895,058 | 53,900,013 | Link |
CDS sequence
ATGAGTGAAGAGGAGCAAGGCTCCGGCACTACCACGGGCTGCGGGCTGCCTAGTTCTTTTTCTCCCCTAGACTCTTCACTGCCTGAGGACATTCCGGTTTTTACTGCTGCAGCAGCTGCTACCCCAGTTCCATCTGTAGTCCTAACCAGGAGCCCCCCCATGGAACTGCAGCCCCCTGTCTCCCCTCAGCAGTCTGAGTGCAACCCCGTTGGTGCTCTGCAGGAGCTGGTGGTGCAGAAAGGCTGGCGGTTGCCGGAGTACACAGTGACCCAGGAGTCTGGGCCAGCCCACCGCAAAGAATTCACCATGACCTGTCGAGTGGAGCGTTTCATTGAGATTGGGTGTGGGCTCCCGCCTGGATGGTCTTCGAAACCGGGGCCCAGGTTGCACCTGGGATTCTCTACGAAATTCAGTAGGAGAGAAGATCCTGTCCCTCCGCAGTTGCTCCCTGGGCTCCCTGGGTGCCCTGGGCCCTGCCTGCTGCCGTGTCCTCAGTGA
Amino sequence
MSEEEQGSGTTTGCGLPSSFSPLDSSLPEDIPVFTAAAAATPVPSVVLTRSPPMELQPPVSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGCGLPPGWSSKPGPRLHLGFSTKFSRREDPVPPQLLPGLPGCPGPCLLPCPQ*