ENST00000549867.5 TFCP2

Information
Transcript ID
ENST00000549867.5
Genome
hg38
Position
chr12:51,094,883-51,173,134
Strand
-
CDS length
1,275
Amino acid length
425
Gene symbol
TFCP2
Gene type
protein-coding
Gene description
transcription factor CP2
Gene Entrez Gene ID
7024
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 51,094,883 51,095,278
12 51,095,989 51,096,040
11 51,098,776 51,098,918
10 51,099,655 51,099,779
9 51,106,525 51,106,613
8 51,107,236 51,107,346
7 51,109,121 51,109,273
6 51,110,877 51,110,983
5 51,116,315 51,116,420
4 51,117,671 51,117,747
3 51,118,621 51,118,772
2 51,172,301 51,172,434
1 51,173,053 51,173,134
CDS
Exon number Type Start Stop
13 CDS 51,095,241 51,095,278
12 CDS 51,095,989 51,096,040
11 CDS 51,098,776 51,098,918
10 CDS 51,099,655 51,099,779
9 CDS 51,106,525 51,106,613
8 CDS 51,107,236 51,107,346
7 CDS 51,109,121 51,109,273
6 CDS 51,110,877 51,110,983
5 CDS 51,116,315 51,116,420
4 CDS 51,117,671 51,117,747
3 CDS 51,118,621 51,118,772
2 CDS 51,172,301 51,172,422
Other genome
Genome Chromosome Start End Links
hg19 chr12 51,488,666 51,566,917 Link
CDS sequence
ATGGCCTGGGCTCTGAAGCTGCCTCTGGCCGACGAAGTGATTGAATCCGGGTTGGTGCAGGACTTTGATGCTAGCCTGTCCGGGATCGGCCAGGAACTGGGTGCTGGTGCCTATAGCATGAGTGATGTCCTTGCATTGCCCATTTTTAAGCAAGAAGAGTCGAGTTTGCCTCCTGATAATGAGAATAAAATCCTGCCTTTTCAATATGTGCTTTGTGCTGCTACCTCTCCAGCAGTGAAACTCCATGATGAAACCCTAACGTATCTCAATCAAGGACAGTCTTATGAAATTCGAATGCTAGACAATAGGAAACTTGGAGAACTTCCAGAAATTAATGGCAAATTGGTGAAGAGTATATTCCGTGTGGTGTTCCATGACAGAAGGCTTCAGTACACTGAGCATCAGCAGCTAGAGGGCTGGAGGTGGAACCGACCTGGAGACAGAATTCTTGACATAGATATCCCGATGTCTGTGGGTATAATCGATCCTAGGGCTAATCCAACTCAACTAAATACAGTGGAGTTCCTGTGGGACCCTGCAAAGAGGACATCTGTGTTTATTCAGGTGCACTGTATTAGCACAGAGTTCACTATGAGGAAACATGGTGGAGAAAAGGGGGTGCCATTCCGAGTACAAATAGATACCTTCAAGGAGAATGAAAACGGGGAATATACTGAGCACTTACACTCGGCCAGCTGCCAGATCAAAGTTTTCAAGCCCAAAGGTGCAGACAGAAAGCAAAAAACGGATAGGGAAAAAATGGAGAAACGAACACCTCATGAAAAGGAGAAATATCAGCCTTCCTATGAGACAACCATACTCACAGAGTGTTCTCCATGGCCCGAGATCACGTATGTCAATAACTCCCCATCACCTGGCTTCAACAGTTCCCATAGCAGTTTTTCTCTTGGGGAAGGGATGGTGCGTCCAAGGTTAACCATTTATGTTTGTCAGGAATCACTGCAGTTGAGGGAGCAGCAACAACAGCAGCAGCAACAGCAGCAGAAGCATGAGGATGGAGACTCAAATGGTACTTTCTTCGTTTACCATGCTATCTATCTAGAAGAACTAACAGCTGTTGAATTGACAGAAAAAATTGCTCAGCTTTTCAGCATTTCCCCTTGCCAGATCAGCCAGATTTACAAGCAGGGGCCAACAGGAATTCATGTGCTCATCAGTGATGAGATGATACAGAACTTTCAGGAAGAAGCATGTTTTATTCTGGACACAATGAAAGCAGAAACCAATGATAGCTATCATATCATACTGAAGTAG
Amino sequence
MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSSFSLGEGMVRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK*