ENST00000544927.5 RAD51AP1
Information
- Transcript ID
- ENST00000544927.5
- Genome
- hg38
- Position
- chr12:4,538,930-4,558,970
- Strand
- +
- CDS length
- 708
- Amino acid length
- 236
- Gene symbol
- RAD51AP1
- Gene type
- protein-coding
- Gene description
- RAD51 associated protein 1
- Gene Entrez Gene ID
- 10635
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,538,930 | 4,538,956 |
| 2 | 4,541,884 | 4,541,933 |
| 3 | 4,543,763 | 4,543,904 |
| 4 | 4,546,309 | 4,546,418 |
| 5 | 4,548,092 | 4,548,178 |
| 6 | 4,548,687 | 4,548,836 |
| 7 | 4,552,983 | 4,553,089 |
| 8 | 4,558,857 | 4,558,970 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 4,538,940 | 4,538,956 |
| 2 | CDS | 4,541,884 | 4,541,933 |
| 3 | CDS | 4,543,763 | 4,543,904 |
| 4 | CDS | 4,546,309 | 4,546,418 |
| 5 | CDS | 4,548,092 | 4,548,178 |
| 6 | CDS | 4,548,687 | 4,548,836 |
| 7 | CDS | 4,552,983 | 4,553,089 |
| 8 | CDS | 4,558,857 | 4,558,901 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 4,648,096 | 4,668,136 | Link |
CDS sequence
ATGGTGCGGCCTGTGAGACATAAGAAACCAGTCAATTACTCACAGTTTGACCACTCTGACAGTGATGATGATTTTGTTTCTGCAACTGTACCTTTAAACAAGAAATCCAGAACAGCACCAAAGGAGTTAAAACAAGATAAACCAAAACCTAACTTGAACAATCTCCGGAAAGAAGAAATCCCAGTACAAGAGAAAACCCCTAAAAAAAGGATGGCTTTAGATGACAAGCTCTACCAGAGAGACTTAGAAGTTGCACTAGCTTTATCAGTGAAGGAACTTCCAACAGTCACCACTAATGTGCAGAACTCTCAAGATAAAAGCATTGAAAAACATGGCAGTAGTAAAATAGAAACAATGAATAAGTCTCCTCATATCTCTAATTGCAGTGTAGCCAGTGATTATTTAGATTTGGATAAGATTACTGTGGAAGATGATGTTGGTGGTGTTCAAGGGAAAAGAAAAGCAGCATCTAAAGCTGCAGCACAGCAGAGGAAGATTCTTCTGGAAGGCAGTGATGGTGATAGTGCTAATGACACTGAACCAGACTTTGCACCTGGTGAAGATTCTGAGGATGATTCTGATTTTTGTGAGAGTGAGGATAATGACGAAGACTTCTCTATGAGAAAAAGTAAAGTTAAAGAAATTAAAAAGAAAGAAGTGAAGCGGCATCTGGAGGTAGCAGAAGTAGCAGCAGCCCACTGGTGGTAG
Amino sequence
MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQEKTPKKRMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKRHLEVAEVAAAHWW*