ENST00000548380.6 SPMIP11
Information
- Transcript ID
- ENST00000548380.6
- Genome
- hg38
- Position
- chr12:48,727,435-48,765,790
- Strand
- +
- CDS length
- 396
- Amino acid length
- 132
- Gene symbol
- SPMIP11
- Gene type
- protein-coding
- Gene description
- sperm microtubule inner protein 11
- Gene Entrez Gene ID
- 255411
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 48,727,435 | 48,727,559 |
| 2 | 48,759,209 | 48,759,331 |
| 3 | 48,764,851 | 48,764,995 |
| 4 | 48,765,607 | 48,765,790 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 48,727,481 | 48,727,559 |
| 2 | CDS | 48,759,209 | 48,759,331 |
| 3 | CDS | 48,764,851 | 48,764,995 |
| 4 | CDS | 48,765,607 | 48,765,655 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 49,121,218 | 49,159,573 | Link |
CDS sequence
ATGGCCTTCTTCAACTTGTATCTATTGGGATATCAAAATTCCTTTCAGAACAAGAAAAGGAACACAACTGAAGAAACAAACCAGAAGGAACCAGAGCCTACTAGGCTTCCCCCCATTATCTCAAAAGATGGGAATTATTCCGTGCACCAGAATAGCCACACAAGATACCACGAAGCTGTCCGGAAGGTGTTGTTGAAGACGTTTCCCAATCAGGTCTTCAGAATCCCCTTGACTGATGCTCAGAACTTCAGCTTCTGGTGGTCCCATGATCCAGGAGTGCGTCCAGAGGAAACCATGCCATGGATCCGGAGCCCACGCCATTGTCTCATAAAAAGCGCGATGACCAGGTTTATGGATCACTCTATTCTCAATGACAGGACCTTCAGTCTGTATTAA
Amino sequence
MAFFNLYLLGYQNSFQNKKRNTTEETNQKEPEPTRLPPIISKDGNYSVHQNSHTRYHEAVRKVLLKTFPNQVFRIPLTDAQNFSFWWSHDPGVRPEETMPWIRSPRHCLIKSAMTRFMDHSILNDRTFSLY*