ENST00000342234.3 SP6

Information
Transcript ID
ENST00000342234.3
Genome
hg38
Position
chr17:47,844,908-47,855,874
Strand
-
CDS length
1,131
Amino acid length
377
Gene symbol
SP6
Gene type
protein-coding
Gene description
Sp6 transcription factor
Gene Entrez Gene ID
80320
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
2 47,844,908 47,848,486
1 47,855,654 47,855,874
CDS
Exon number Type Start Stop
2 CDS 47,847,299 47,848,429
Other genome
Genome Chromosome Start End Links
hg19 chr17 45,922,274 45,933,240 Link
CDS sequence
ATGCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGACCTGCAGCCTCTCCAAACTTACCAGGGCCACACGAGCCCTGAGGCCGGGGACTACCCCTCCCCGCTGCAGCCTGGAGAGCTGCAGAGCCTCCCGCTGGGCCCGGAGGTGGACTTCTCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGGGTAACCTGCGAGGACCTGGAAAGCGACAGTCCCTTGGCCCCGGGCCCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCATTATGAATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGACCTCACCTGGCCACCCGGGGGCGCTTCAGGCGGGCTTGGGGGGCTACGTCGGAGACCACCAGCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTTGGAAGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGGAGCGACTGGGGGCTCCATGTGGGCCCGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCACATCCCGGGCTGCGGGAAAGCCTACGCCAAGACGTCGCACCTGAAGGCGCACCTGCGCTGGCACAGCGGCGACCGTCCCTTCGTGTGCAACTGGCTCTTCTGCGGCAAGCGCTTCACGCGCTCGGACGAGCTGCAGCGCCACCTCCAGACCCACACCGGCACCAAGAAGTTCCCCTGTGCAGTCTGCAGCCGCGTCTTCATGCGCAGCGACCACCTGGCCAAGCACATGAAAACCCACGAGGGCGCCAAGGAGGAGGCGGCTGGGGCGGCCTCGGGAGAGGGCAAGGCCGGCGGCGCAGTGGAGCCCCCCGGGGGCAAAGGCAAACGCGAGGCCGAGGGCAGCGTGGCTCCCTCCAACTGA
Amino sequence
MLTAVCGSLGSQHTEAPHASPPRLDLQPLQTYQGHTSPEAGDYPSPLQPGELQSLPLGPEVDFSQGYELPGASSRVTCEDLESDSPLAPGPFSKLLQPDMSHHYESWFRPTHPGAEDGSWWDLHPGTSWMDLPHTQGALTSPGHPGALQAGLGGYVGDHQLCAPPPHPHAHHLLPAAGGQHLLGPPDGAKALEVAAPESQGLDSSLDGAARPKGSRRSVPRSSGQTVCRCPNCLEAERLGAPCGPDGGKKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTHEGAKEEAAGAASGEGKAGGAVEPPGGKGKREAEGSVAPSN*