ENST00000379600.8 NHLRC3

Information
Transcript ID
ENST00000379600.8
Genome
hg38
Position
chr13:39,038,456-39,050,109
Strand
+
CDS length
1,044
Amino acid length
348
Gene symbol
NHLRC3
Gene type
protein-coding
Gene description
NHL repeat containing 3
Gene Entrez Gene ID
387921
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 39,038,456 39,038,723
2 39,039,136 39,039,288
3 39,039,564 39,039,711
4 39,042,105 39,042,305
5 39,044,090 39,044,181
6 39,047,040 39,047,152
7 39,047,674 39,050,109
CDS
Exon number Type Start Stop
1 CDS 39,038,640 39,038,723
2 CDS 39,039,136 39,039,288
3 CDS 39,039,564 39,039,711
4 CDS 39,042,105 39,042,305
5 CDS 39,044,090 39,044,181
6 CDS 39,047,040 39,047,152
7 CDS 39,047,674 39,047,926
Other genome
Genome Chromosome Start End Links
hg19 chr13 39,612,593 39,624,246 Link
CDS sequence
ATGGCGAGATTCTGGGTCTGCGTAGCCGGTGCTGGCTTCTTTCTTGCATTTTTGGTTTTGCATTCGCGTTTTTGTGGCTCTCCAGTTTTGAGGAACTTTACTTTTGCAGTTTCCTGGAGAACTGAGAAAATTCTTTACCGGCTGGATGTGGGTTGGCCTAAGCACCCAGAATATTTTACCGGAACAACATTTTGTGTTGCAGTTGACTCCCTCAATGGATTGGTTTACATAGGTCAAAGAGGGGATAACATCCCAAAGATATTAGTGTTCACAGAGGATGGATATTTCCTACGAGCCTGGAATTATACAGTTGACACACCTCATGGTATATTTGCAGCCAGTACTCTATATGAACAATCCGTCTGGATCACGGATGTAGGAAGTGGATTCTTTGGTCATACTGTTAAAAAATACAGTTCTTTTGGTGATCTTGTTCAAGTCTTGGGTACTCCAGGCAAAAAAGGCACTAGTTTGAATCCTTTGCAGTTTGATAACCCAGCAGAATTATATGTAGAGGACACAGGAGATATTTACATTGTGGATGGAGATGGAGGATTGAATAACAGATTGATCAAACTGTCCCAAGATTTCATGATCCTTTGGCTGCATGGAGAAAATGGGACAGGGCCTGCTAAGTTCAACATACCTCACAGTGTTACACTTGATTCAGCTGGTCGGGTGTGGGTTGCTGACCGAGGAAATAAAAGAATCCAAGTATTTGATAAAGACACTGGGGAGTGGTTAGGAGCATGGAATAATTGTTTCACAGAAGAGGGACCTTCTTCAGTCAGGTTTACTCCTGATGGGAAGTACTTGATTGTGGCCCAGCTGAATCTTAGCAGGCTCTCAGTCGTAGCAGCACCCCCAGTGGGAAGCATTGGGGAGTGTTCTGTGATCAGCACAATCCAACTAGCAGATCAAGTTTTGCCACATCTCCTAGAAGTCGACAGAAAGACTGGAGCAGTCTATGTAGCAGAAATTGGAGCAAAACAAGTACAAAAATATGTCCCTTTGAATAGCTATGTTCCTTCATTTGGTTCATAA
Amino sequence
MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFTGTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNPLQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS*