ENST00000659177.1 CALM1
Information
- Transcript ID
- ENST00000659177.1
- Genome
- hg38
- Position
- chr14:90,397,692-90,404,760
- Strand
- +
- CDS length
- 342
- Amino acid length
- 114
- Gene symbol
- CALM1
- Gene type
- protein-coding
- Gene description
- calmodulin 1
- Gene Entrez Gene ID
- 801
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 90,397,692 | 90,397,858 |
2 | 90,400,065 | 90,400,095 |
3 | 90,401,259 | 90,401,402 |
4 | 90,403,862 | 90,403,968 |
5 | 90,404,379 | 90,404,514 |
6 | 90,404,689 | 90,404,760 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
3 | CDS | 90,401,333 | 90,401,402 |
4 | CDS | 90,403,862 | 90,403,968 |
5 | CDS | 90,404,379 | 90,404,514 |
6 | CDS | 90,404,689 | 90,404,717 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr14 | 90,864,036 | 90,871,104 | Link |
CDS sequence
ATGAGGTCACTGGGTCAGAACCCAACAGAAGCTGAATTGCAGGATATGATCAATGAAGTGGATGCTGATGGTAATGGCACCATTGACTTCCCCGAATTTTTGACTATGATGGCTAGAAAAATGAAAGATACAGATAGTGAAGAAGAAATCCGTGAGGCATTCCGAGTCTTTGACAAGGATGGCAATGGTTATATCAGTGCAGCAGAACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAGATGAAGAAGTAGATGAAATGATCAGAGAAGCAGATATTGATGGAGACGGACAAGTCAACTATGAAGAATTCGTACAGATGATGACTGCAAAATGA
Amino sequence
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK*