ENST00000458167.6 GPN1

Information
Transcript ID
ENST00000458167.6
Genome
hg38
Position
chr2:27,628,648-27,650,844
Strand
+
CDS length
840
Amino acid length
280
Gene symbol
GPN1
Gene type
protein-coding
Gene description
GPN-loop GTPase 1
Gene Entrez Gene ID
11321
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 27,628,648 27,628,714
2 27,629,859 27,629,952
3 27,632,633 27,632,670
4 27,634,846 27,634,924
5 27,635,140 27,635,234
6 27,638,210 27,638,255
7 27,638,885 27,639,031
8 27,640,043 27,640,125
9 27,641,240 27,641,279
10 27,642,429 27,642,519
11 27,647,836 27,647,943
12 27,650,115 27,650,844
CDS
Exon number Type Start Stop
2 CDS 27,629,926 27,629,952
3 CDS 27,632,633 27,632,670
4 CDS 27,634,846 27,634,924
5 CDS 27,635,140 27,635,234
6 CDS 27,638,210 27,638,255
7 CDS 27,638,885 27,639,031
8 CDS 27,640,043 27,640,125
9 CDS 27,641,240 27,641,279
10 CDS 27,642,429 27,642,519
11 CDS 27,647,836 27,647,943
12 CDS 27,650,115 27,650,200
Other genome
Genome Chromosome Start End Links
hg19 chr2 27,851,515 27,873,711 Link
CDS sequence
ATGAAGTTCCCTTTCCTGCCAATATTGGTGATGAAATTTATTGAGAAGGCCCAGAACATGTCCAAATATGTGTTGATTGACACACCTGGACAGATTGAGGTATTCACCTGGTCAGCTTCTGGGACAATTATCACTGAAGCCCTTGCATCCTCATTTCCAACAGTTGTCATCTATGTAATGGACACATCGAGAAGTACCAACCCAGTGACCTTCATGTCCAACATGCTCTATGCCTGCAGCATCTTATACAAAACCAAGCTGCCTTTCATTGTGGTCATGAATAAAACTGACATCATTGACCACAGCTTTGCAGTGGAATGGATGCAGGATTTTGAGGCTTTCCAAGATGCCTTGAATCAAGAGACTACATACGTCAGTAACCTGACTCGTTCAATGAGCCTGGTGTTAGATGAGTTTTACAGCTCACTCAGGGTGGTGGGTGTCTCTGCTGTTCTGGGTACTGGATTAGATGAACTCTTTGTGCAAGTTACCAGTGCTGCCGAAGAATATGAAAGGGAGTATCGTCCTGAATATGAACGTCTGAAAAAATCACTGGCCAACGCAGAGAGCCAACAGCAGAGAGAACAACTGGAACGCCTTCGAAAAGATATGGGTTCTGTAGCCTTGGATGCAGGGACTGCCAAAGACAGCTTATCTCCTGTGCTGCACCCTTCTGATTTGATCCTGACTCGAGGAACCTTGGATGAAGAGGATGAGGAAGCAGACAGCGATACTGATGACATTGACCACAGAGTTACAGAGGAAAGCCATGAAGAGCCAGCATTCCAGAATTTTATGCAAGAATCGATGGCACAATACTGGAAGAGAAACAATAAATAG
Amino sequence
MKFPFLPILVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSAAEEYEREYRPEYERLKKSLANAESQQQREQLERLRKDMGSVALDAGTAKDSLSPVLHPSDLILTRGTLDEEDEEADSDTDDIDHRVTEESHEEPAFQNFMQESMAQYWKRNNK*