ENST00000697831.1 SKIC2

Information
Transcript ID
ENST00000697831.1
Genome
hg38
Position
chr6:31,959,116-31,969,780
Strand
+
CDS length
3,672
Amino acid length
1,224
Gene symbol
SKIC2
Gene type
protein-coding
Gene description
SKI2 subunit of superkiller complex
Gene Entrez Gene ID
6499
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 31,959,116 31,959,214
2 31,959,297 31,959,400
3 31,960,010 31,960,119
4 31,960,220 31,960,337
5 31,960,432 31,960,546
6 31,960,666 31,960,740
7 31,961,041 31,961,094
8 31,961,196 31,961,386
9 31,961,547 31,961,675
10 31,961,909 31,962,054
11 31,962,439 31,962,585
12 31,962,714 31,962,798
13 31,962,985 31,963,091
14 31,963,413 31,963,559
15 31,963,637 31,963,733
16 31,963,913 31,964,125
17 31,964,232 31,964,342
18 31,965,783 31,966,013
19 31,966,709 31,966,846
20 31,967,004 31,967,141
21 31,967,273 31,967,377
22 31,967,715 31,967,862
23 31,967,956 31,968,017
24 31,968,332 31,968,538
25 31,968,686 31,968,796
26 31,968,871 31,969,089
27 31,969,280 31,969,420
28 31,969,515 31,969,780
CDS
Exon number Type Start Stop
1 CDS 31,959,193 31,959,214
2 CDS 31,959,297 31,959,400
3 CDS 31,960,010 31,960,119
4 CDS 31,960,220 31,960,337
5 CDS 31,960,432 31,960,546
6 CDS 31,960,666 31,960,740
7 CDS 31,961,041 31,961,094
8 CDS 31,961,196 31,961,386
9 CDS 31,961,547 31,961,675
10 CDS 31,961,909 31,962,054
11 CDS 31,962,439 31,962,585
12 CDS 31,962,714 31,962,798
13 CDS 31,962,985 31,963,091
14 CDS 31,963,413 31,963,559
15 CDS 31,963,637 31,963,733
16 CDS 31,963,913 31,964,125
17 CDS 31,964,232 31,964,342
18 CDS 31,965,783 31,966,013
19 CDS 31,966,709 31,966,846
20 CDS 31,967,004 31,967,141
21 CDS 31,967,273 31,967,377
22 CDS 31,967,715 31,967,862
23 CDS 31,967,956 31,968,017
24 CDS 31,968,332 31,968,538
25 CDS 31,968,686 31,968,796
26 CDS 31,968,871 31,969,089
27 CDS 31,969,280 31,969,420
28 CDS 31,969,515 31,969,715
Other genome
Genome Chromosome Start End Links
hg19 chr6 31,926,893 31,937,557 Link
CDS sequence
ATGATGGAGACAGAGCGACTTGTGCTACCCCCTCCAGATCCCCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCCTTCCCCATGGCCTCCCTCCTTGTGCCCCAGATCTGCAGCAAGAAGCAGAACAGTTGTTTCTGTCATCCCCAGCCTGGCTGCCTCTGCATGGTGTGGAGCACTCAGCCCGAAAATGGCAGAGGAAGACGGATCCCTGGTCTCTTTTGGCTGTCCTGGGAGCCCCAGTCCCATCCGACCTACAGGCCCAAAGACACCCAACCACAGGCCAGATACTGGGTTACAAAGAGGTCTTGCTGGAGAACACAAATCTCTCGGCTACAACCTCCTTGTCTCTTCGCCGGCCTCCAGGGCCAGCCTCCCAGTCCTTATGGGGAAATCCAACTCAGTATCCCTTCTGGCCAGGGGGGATGGATGAACCCACCATAACAGATCTGAACACACGGGAGGAGGCTGAGGAGGAGATAGACTTTGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGATTGTCCAACTCCAGCTCCTGGACTACTAAGCCTTAGCTGTATGTTGGAGCCTCTGGATTTGGGTGGGGGTGACGAGGATGAGAATGAGGCAGTGGGACAGCCAGGAGGTCCCAGAGGGGACACTGTTTCAGCCTCTCCCTGCAGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACCTAGTGTTGAAGGAAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGACGCCACCTCCCCTGTTGGTGATTTCTATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAAAACAGTTGTGGCTGAATATGCCATTGCCCTGGCCCAGAAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTCACTATATCAACGATGTCGAGCGTGGGGTCGTGTGGGAGGAGGTGCTTATCATGCTACCTGACCACGTTTCTATCATCCTTCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGCTGACTGGATTGGGCGGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACCCGCCCCGTGCCCCTGGAGCACTATCTTTTCACAGGGAACAGCTCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCATACAAAAGGGTACTATGCAGCTGTGGAGGCCAAGAAGGAGAGAATGAGCAAACACGCCCAGACCTTTGGGGCCAAGCAGCCCACACATCAGGGGGGCCCTGCACAGGACCGCGGAGTGTACCTGTCCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGCCCGTGGTGGTGTTCACCTTCTCCCGGGGCCGCTGTGATGAGCAGGCCTCAGGCCTCACCTCCCTTGACCTCACCACCAGTTCGGAGAAGAGCGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCTCGCCTCCGTGGCTCTGACCGCCAGCTGCCCCAGGTCCTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTGTTTGCCACAGAGACCTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGGAGTATGTGCAGATGGCAGGCCGGGCAGGGCGGAGGGGCCTGGACCCCACAGGCACCGTTATCCTGCTCTGCAAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGATGCCCTCAGGGTGGAGGACATGATGAAGAGGAGCTTCTCTGAGTTTCCCTCCCGCAAAGACAGCAAGGCCCATGAACAGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTTGGAGGAGCCTGACATGACTGGCCAACTGGTCGACCTGCCTGAATATTACAGCTGGGGGGAGGAACTGACAGAGACCCAGCACATGATCCAGCGACGCATCATGGAGTCTGTGAACGGGCTGAAGTCTCTCTCAGCAGGAAGGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATCCTACAGGTCTCCTCGAACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGATCCAGGGGGCTCAGTGTGTACACAGCCCCCGTTTTCCTGCCCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGGCTGCGCTTCCTACTGTCGGATCAGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTGCTCCGAACCCTGGGTTATGTGGACGAGGCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGGGACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGAGCTGAATTTTGGGCTGGTTGAGGTTGTATATGAGTGGGCCCGGGGCATGCCCTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCCTGGTGGTCCGCTGCATTCAGCGCCTGGCTGAGATGTGTCGCTCACTGCGGGGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGA
Amino sequence
MMETERLVLPPPDPLDLPLRAVELGCTGHWELLNLPGAPESSLPHGLPPCAPDLQQEAEQLFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVLLENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTITDLNTREEAEEEIDFEKDLLTIPPGFKKGMDFAPKDCPTPAPGLLSLSCMLEPLDLGGGDEDENEAVGQPGGPRGDTVSASPCSAPLARASSLEDLVLKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGDFYRLIPQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ*