ENST00000409327.2 CYP27C1
Information
- Transcript ID
- ENST00000409327.2
- Genome
- hg38
- Position
- chr2:127,186,410-127,220,313
- Strand
- -
- CDS length
- 1,119
- Amino acid length
- 373
- Gene symbol
- CYP27C1
- Gene type
- protein-coding
- Gene description
- cytochrome P450 family 27 subfamily C member 1
- Gene Entrez Gene ID
- 339761
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 127,186,410 | 127,187,387 |
| 7 | 127,193,094 | 127,193,297 |
| 6 | 127,193,789 | 127,193,867 |
| 5 | 127,195,335 | 127,195,501 |
| 4 | 127,199,376 | 127,199,539 |
| 3 | 127,201,122 | 127,201,331 |
| 2 | 127,203,372 | 127,203,571 |
| 1 | 127,219,989 | 127,220,313 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 127,187,271 | 127,187,387 |
| 7 | CDS | 127,193,094 | 127,193,297 |
| 6 | CDS | 127,193,789 | 127,193,867 |
| 5 | CDS | 127,195,335 | 127,195,501 |
| 4 | CDS | 127,199,376 | 127,199,539 |
| 3 | CDS | 127,201,122 | 127,201,331 |
| 2 | CDS | 127,203,372 | 127,203,549 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 127,943,986 | 127,977,889 | Link |
CDS sequence
ATGAGAAGCGTATTGAGACAAAGAATTCTGAAACCGAAAGATGTGGCCATTTATTCTGGAGAAGTCAACCAAGTTATTGCTGACTTAATTAAAAGAATCTACCTCCTCAGGAGCCAGGCAGAAGATGGAGAAACCGTGACCAATGTCAATGATCTTTTCTTCAAATATTCAATGGAAGGAGTGGCCACCATCCTTTATGAGAGTCGTTTGGGCTGCCTGGAAAACAGCATCCCACAGCTGACTGTGGAATACATCGAGGCCCTGGAGCTCATGTTTAGCATGTTCAAGACCTCCATGTATGCAGGCGCCATCCCCAGATGGCTTCGCCCCTTCATCCCAAAGCCCTGGCGGGAATTCTGCAGGTCCTGGGATGGACTCTTCAAATTCAGCCAAATTCATGTTGACAACAAGTTGAGGGACATACAGTACCAAATGGACCGAGGCCGGAGGGTGAGCGGGGGACTTCTCACATACCTCTTCCTTAGCCAGGCTCTGACGCTGCAGGAGATCTACGCCAACGTGACTGAGATGCTGCTGGCCGGCGTCGACACGACGTCCTTCACCTTGTCTTGGACTGTGTACCTCCTGGCAAGGCACCCAGAAGTGCAGCAGACGGTGTACCGGGAGATTGTGAAGAATTTAGGGGAAAGGCATGTTCCAACTGCAGCTGATGTCCCCAAGGTCCCGCTGGTCAGAGCTCTCCTTAAGGAAACCCTGAGGCTGTTTCCAGTGCTGCCAGGGAACGGCCGGGTCACCCAGGAAGACCTGGTTATTGGCGGGTATCTGATTCCGAAAGGCACCCAGCTGGCCCTTTGCCACTATGCCACATCGTACCAGGATGAGAACTTCCCTCGGGCCAAGGAGTTCCGGCCTGAGCGCTGGCTGCGGAAAGGAGACTTAGATAGAGTTGACAATTTTGGATCCATCCCCTTTGGTCATGGGGTTCGCAGCTGCATAGGGCGGAGAATTGCAGAACTGGAGATTCACCTCGTCGTGATCCAGTTGCTTCAACATTTTGAGATCAAAACATCTTCTCAGACCAATGCTGTTCATGCAAAAACCCACGGGCTCCTGACGCCAGGGGGGCCCATCCACGTGCGATTTGTTAACAGAAAGTAA
Amino sequence
MRSVLRQRILKPKDVAIYSGEVNQVIADLIKRIYLLRSQAEDGETVTNVNDLFFKYSMEGVATILYESRLGCLENSIPQLTVEYIEALELMFSMFKTSMYAGAIPRWLRPFIPKPWREFCRSWDGLFKFSQIHVDNKLRDIQYQMDRGRRVSGGLLTYLFLSQALTLQEIYANVTEMLLAGVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLDRVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFEIKTSSQTNAVHAKTHGLLTPGGPIHVRFVNRK*