chr19:1207047:TCATCGGCAAGT> Detail (hg38) (STK11)

Information

Genome

Assembly Position
hg19 chr19:1,207,046-1,207,057 
hg38 chr19:1,207,047-1,207,058

HGVS

Type Transcript Protein
RefSeq NM_000455.4:c.134_145delTCATCGGCAAGT NP_000446.1:p.Leu45_Tyr49delinsHis
Ensemble ENST00000326873.12:c.134_145delTCATCGGCAAGT ENST00000326873.12:p.Leu45_Tyr49delinsHis
ENST00000585465.3:c.134_145delTCATCGGCAAGT ENST00000585465.3:p.Leu45_Tyr49delinsHis
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Pathogenic
Review star
Show details
Links
Type Database ID Link
Gene MIM 602216 OMIM
HGNC 11389 HGNC
Ensembl ENSG00000118046 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic 2013-11-27 criteria provided, single submitter Hereditary cancer-predisposing syndrome germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.120 Neoplastic Syndromes, Hereditary NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000455.5(STK11):c.134_145del (p.Leu45_Tyr49delinsHis) AND Hereditary cancer-predisposing syndrome ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs730881958 dbSNP
Genome
hg38
Position
chr19:1,207,047-1,207,058
Variant Type
snv
Reference Allele
TCATCGGCAAGT
Alternative Allele
-
Genome browser