chr16:23646190:TT>C Detail (hg19) (PALB2)
Information
Genome
Assembly | Position |
---|---|
hg19 | chr16:23,646,190-23,646,191 |
hg38 | chr16:23,634,869-23,634,870 View the variant detail on this assembly version. |
HGVS
Type | Transcript | Protein |
---|---|---|
RefSeq | NM_024675.3:c.1676_1677delinsG | NP_078951.2:p.Gln559ArgfsTer2 |
Ensemble | ENST00000566069.6:c.1676_1677delinsG | ENST00000566069.6:p.Gln559ArgfsTer2 |
ENST00000697383.1:c.49-5595_49-5594delinsG |
Summary
MGeND
Clinical significance | |
Variant entry | |
GWAS entry | |
Disease area statistics | Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
---|---|---|---|---|---|
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2023-02-28 | criteria provided, multiple submitters, no conflicts | not provided |
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Detail |
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2022-01-20 | criteria provided, multiple submitters, no conflicts | Hereditary cancer-predisposing syndrome |
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Detail |
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2019-05-13 | no assertion criteria provided | Fanconi anemia complementation group N |
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Detail |
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2023-09-11 | criteria provided, multiple submitters, no conflicts | Familial cancer of breast |
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Detail |
CIViC
[No Data.]
DisGeNET
Score | Disease name | Description | Source | Pubmed | Links |
---|---|---|---|---|---|
0.240 | FANCONI ANEMIA, COMPLEMENTATION GROUP N | NA | CLINVAR | Detail |
Annotation
Annotations
Descrption | Source | Links |
---|---|---|
NM_024675.4(PALB2):c.1676_1677delinsG (p.Gln559fs) AND not provided | ClinVar | Detail |
NM_024675.4(PALB2):c.1676_1677delinsG (p.Gln559fs) AND Hereditary cancer-predisposing syndrome | ClinVar | Detail |
NM_024675.4(PALB2):c.1676_1677delinsG (p.Gln559fs) AND Fanconi anemia complementation group N | ClinVar | Detail |
NM_024675.4(PALB2):c.1676_1677delinsG (p.Gln559fs) AND Familial cancer of breast | ClinVar | Detail |
NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
---|
Overlapped Transcript
Gene | Transcript ID | Chromosome | Start | Stop | Links |
---|
- Gene
- -
- dbSNP
- rs515726073 dbSNP
- Genome
- hg19
- Position
- chr16:23,646,190-23,646,191
- Variant Type
- snv
- Reference Allele
- TT
- Alternative Allele
- C
Genome browser