chr10:43609097:G>C Detail (hg19) (RET)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr10:43,609,097-43,609,097 |
| hg38 | chr10:43,113,649-43,113,649 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_020630.4:c.1853G>C | NP_065681.1:p.Cys618Ser |
| NM_020975.4:c.1853G>C | NP_066124.1:p.Cys618Ser | |
| Ensemble | ENST00000713926.1:c.1724G>C | ENST00000713926.1:p.Cys575Ser |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
|
2023-04-18 | criteria provided, multiple submitters, no conflicts | multiple endocrine neoplasia type 2A |
|
Detail |
|
|
1994-04-01 | no assertion criteria provided | familial medullary thyroid carcinoma |
|
Detail |
|
|
2020-07-27 | criteria provided, multiple submitters, no conflicts | not provided |
|
Detail |
|
|
2023-11-30 | criteria provided, single submitter | Multiple endocrine neoplasia, type 2 |
|
Detail |
|
|
2022-09-12 | criteria provided, single submitter | Hereditary cancer-predisposing syndrome |
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.614 | multiple endocrine neoplasia type 2A | NA | CLINVAR | Detail | |
| 0.126 | Neoplastic Syndromes, Hereditary | NA | CLINVAR | Detail | |
| 0.522 | familial medullary thyroid carcinoma | NA | CLINVAR | Detail | |
| 0.614 | multiple endocrine neoplasia type 2A | MEN2A (C618S), MEN2A/familial MTC (FMTC) (C620S), and MEN2B (M918T). | BeFree | 22199277 | Detail |
| 0.592 | multiple endocrine neoplasia type 2B | MEN2A (C618S), MEN2A/familial MTC (FMTC) (C620S), and MEN2B (M918T). | BeFree | 22199277 | Detail |
| 0.614 | multiple endocrine neoplasia type 2A | RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | UNIPROT | 7849720 | Detail |
| 0.200 | Hirschsprung disease, susceptibility to, 1 | RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | UNIPROT | 7849720 | Detail |
| 0.522 | familial medullary thyroid carcinoma | RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | UNIPROT | 7849720 | Detail |
| 0.522 | familial medullary thyroid carcinoma | A Korean family of familial medullary thyroid cancer with Cys618Ser RET germline... | BeFree | 20119574 | Detail |
| 0.614 | multiple endocrine neoplasia type 2A | Therefore, we suggest that MEN 2A families should not be subclassified into MEN ... | BeFree | 9003111 | Detail |
| 0.522 | familial medullary thyroid carcinoma | The predisposing RET mutation in all seven families had been previously reported... | BeFree | 9384613 | Detail |
| 0.522 | familial medullary thyroid carcinoma | Case report: a p.C618S RET proto-oncogene germline mutation in a large Chinese p... | BeFree | 22068382 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_020975.6(RET):c.1853G>C (p.Cys618Ser) AND Multiple endocrine neoplasia type 2A | ClinVar | Detail |
| NM_020975.6(RET):c.1853G>C (p.Cys618Ser) AND Familial medullary thyroid carcinoma | ClinVar | Detail |
| NM_020975.6(RET):c.1853G>C (p.Cys618Ser) AND not provided | ClinVar | Detail |
| NM_020975.6(RET):c.1853G>C (p.Cys618Ser) AND Multiple endocrine neoplasia, type 2 | ClinVar | Detail |
| NM_020975.6(RET):c.1853G>C (p.Cys618Ser) AND Hereditary cancer-predisposing syndrome | ClinVar | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| MEN2A (C618S), MEN2A/familial MTC (FMTC) (C620S), and MEN2B (M918T). | DisGeNET | Detail |
| MEN2A (C618S), MEN2A/familial MTC (FMTC) (C620S), and MEN2B (M918T). | DisGeNET | Detail |
| RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | DisGeNET | Detail |
| RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | DisGeNET | Detail |
| RET proto-oncogene mutations in inherited and sporadic medullary thyroid cancer. | DisGeNET | Detail |
| A Korean family of familial medullary thyroid cancer with Cys618Ser RET germline mutation. | DisGeNET | Detail |
| Therefore, we suggest that MEN 2A families should not be subclassified into MEN 2A and FMTC, but rat... | DisGeNET | Detail |
| The predisposing RET mutation in all seven families had been previously reported in MEN 2A or FMTC a... | DisGeNET | Detail |
| Case report: a p.C618S RET proto-oncogene germline mutation in a large Chinese pedigree with familia... | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs79781594 dbSNP
- Genome
- hg19
- Position
- chr10:43,609,097-43,609,097
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- C
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