chr11:94227125:C>A Detail (hg19) (MRE11)

Information

Genome

Assembly Position
hg19 chr11:94,227,125-94,227,125
hg38 chr11:94,493,959-94,493,959 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.432
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance Benign
Review star
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Benign 2018-06-22 criteria provided, single submitter not provided germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.005 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.021 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.020 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
<0.001 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
<0.001 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.214 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.100 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
<0.001 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.010 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.003 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
0.014 Carcinoma of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
<0.001 Malignant neoplasm of lung SNPs associated with lung cancer prognosis primarily mapped to 14 genes in diffe... BeFree 21739480 Detail
Annotation

Annotations

DescrptionSourceLinks
NC_000011.10:g.94493959C>A AND not provided ClinVar Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
SNPs associated with lung cancer prognosis primarily mapped to 14 genes in different repair pathways... DisGeNET Detail
Gene
-
dbSNP
rs11020802 dbSNP
Genome
hg19
Position
chr11:94,227,125-94,227,125
Variant Type
snv
Reference Allele
C
Alternative Allele
A
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs11020802
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.4323
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
7245
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16758
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