chr12:25398282:C>A Detail (hg19) (KRAS)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr12:25,398,282-25,398,282 |
| hg38 | chr12:25,245,348-25,245,348 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_004985.4:c.37G>T | NP_004976.2:p.Gly13Cys |
| NM_033360.3:c.37G>T | NP_203524.1:p.Gly13Cys | |
| Ensemble | ENST00000256078.10:c.37G>T | ENST00000256078.10:p.Gly13Cys |
Summary
MGeND
| Clinical significance |
|
| Variant entry | 37 |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
ClinVar
| Clinical Significance |
|
| Review star | ![]() |
| Show details | |
Disease area statistics
MGeND
| Clinical significance | Last evaluated | Condition | Origin | Submission ID | Submitter | Institute | Citation | Comment | Image |
|---|---|---|---|---|---|---|---|---|---|
|
|
2020/04/20 | pyloric antrum |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | jejunum |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | ascending colon |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | descending colon |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | sigmoid colon |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | malignant neoplasm of rectosigmoid junction |
|
MGS000040
(TMGS000095) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
Adenocarcinoma of lung (disorder) |
|
MGS000021
(TMGS000080) |
Manabu Muto | Kyoto University | ||||
|
|
2020/04/20 | ascending colon |
|
MGS000042
(TMGS000093) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | sigmoid colon |
|
MGS000042
(TMGS000093) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | colon, unspecified |
|
MGS000042
(TMGS000093) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | bronchus or lung, unspecified |
|
MGS000042
(TMGS000093) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | jejunum |
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | descending colon |
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | colon, unspecified |
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | malignant neoplasm of rectosigmoid junction |
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan | |||
|
|
2020/04/20 | bronchus or lung, unspecified |
|
MGS000041
(TMGS000094) |
Hitoshi Nakagama | National Cancer Center Japan |
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
|
|
2012-09-17 | criteria provided, single submitter | Non-small cell lung carcinoma |
|
Detail |
|
|
2023-01-03 | criteria provided, multiple submitters, no conflicts | autoimmune lymphoproliferative syndrome type 4 |
|
Detail |
|
|
2015-07-14 | no assertion criteria provided | Neoplasm of the large intestine |
|
Detail |
|
|
2022-09-21 | criteria provided, multiple submitters, no conflicts | not provided |
|
Detail |
|
|
criteria provided, single submitter | KRAS-related disorder |
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.155 | squamous cell carcinoma | KRAS mutations were found in 18 (7.2%) patients (15 in adenocarcinoma, 2 in squa... | BeFree | 24040454 | Detail |
| 0.309 | adenocarcinoma | KRAS mutations were found in 18 (7.2%) patients (15 in adenocarcinoma, 2 in squa... | BeFree | 24040454 | Detail |
| 0.241 | pilocytic astrocytoma | NA | CLINVAR | Detail | |
| 0.149 | Carcinogenesis | This system allowed us to rapidly compare the ability of 12 different KRAS mutat... | BeFree | 25065594 | Detail |
| 0.240 | RAS-ASSOCIATED AUTOIMMUNE LEUKOPROLIFERATIVE DISORDER | NA | CLINVAR | Detail | |
| 0.321 | Non-small cell lung carcinoma | NA | CLINVAR | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_004985.5(KRAS):c.37G>T (p.Gly13Cys) AND Non-small cell lung carcinoma | ClinVar | Detail |
| NM_004985.5(KRAS):c.37G>T (p.Gly13Cys) AND Autoimmune lymphoproliferative syndrome type 4 | ClinVar | Detail |
| NM_004985.5(KRAS):c.37G>T (p.Gly13Cys) AND Neoplasm of the large intestine | ClinVar | Detail |
| NM_004985.5(KRAS):c.37G>T (p.Gly13Cys) AND not provided | ClinVar | Detail |
| NM_004985.5(KRAS):c.37G>T (p.Gly13Cys) AND KRAS-related disorder | ClinVar | Detail |
| KRAS mutations were found in 18 (7.2%) patients (15 in adenocarcinoma, 2 in squamous cell carcinoma ... | DisGeNET | Detail |
| KRAS mutations were found in 18 (7.2%) patients (15 in adenocarcinoma, 2 in squamous cell carcinoma ... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| This system allowed us to rapidly compare the ability of 12 different KRAS mutations (G12A, G12C, G1... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs121913535 dbSNP
- Genome
- hg19
- Position
- chr12:25,398,282-25,398,282
- Variant Type
- snv
- Reference Allele
- C
- Alternative Allele
- A
- Variant (CIViC) (CIViC Variant)
- G13C
- Transcript 1 (CIViC Variant)
- ENST00000256078.4
- Variant URL (CIViC Variant)
- https://civic.genome.wustl.edu/links/variants/911
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