chr13:28932830:T>A Detail (hg19) (FLT1)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
Genome browser

Information

Genome

Assembly	Position
hg19	chr13:28,932,830-28,932,830
hg38	chr13:28,358,693-28,358,693 View the variant detail on this assembly version.

HGVS

FLT1

Type	Transcript	Protein
RefSeq	NM_002019.4:c.2117-1008A>T
Ensemble	ENST00000282397.9:c.2117-1008A>T

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance
Review star	[No Data.]
Show details

Links

FLT1

Type	Database	ID	Link
Gene	MIM	165070	OMIM
	HGNC	3763	HGNC
	Ensembl	ENSG00000102755	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

[No Data.]

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
<0.001	gastroesophageal reflux disease	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	Adenocarcinoma Of Esophagus	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	Adenocarcinoma Of Esophagus	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	Adenocarcinoma Of Esophagus	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	gastroesophageal reflux disease	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	gastroesophageal reflux disease	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail
<0.001	Adenocarcinoma Of Esophagus	In subsequent logistic regression analyses, interactions between 2 SNPs (rs22957...	BeFree	21751195	Detail

Annotation

Annotations

Descrption	Source	Links
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail
In subsequent logistic regression analyses, interactions between 2 SNPs (rs2295778 of HIF1AN, rs1333...	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs17625898 dbSNP
Genome: hg19
Position: chr13:28,932,830-28,932,830
Variant Type: snv
Reference Allele: T
Alternative Allele: A

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