chr17:7577544:A>C Detail (hg19) (TP53)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
Genome browser

Information

Genome

Assembly	Position
hg19	chr17:7,577,544-7,577,544
hg38	chr17:7,674,226-7,674,226 View the variant detail on this assembly version.

HGVS

TP53

Type	Transcript	Protein
RefSeq	NM_001126116.1:c.341T>G	NP_001119588.1:p.Met114Arg
	NM_001276698.1:c.341T>G	NP_001263627.1:p.Met114Arg
	NM_000546.5:c.737T>G	NP_000537.3:p.Met246Arg
	NM_001126112.2:c.737T>G	NP_001119584.1:p.Met246Arg
	NM_001276760.1:c.737T>G	NP_001263689.1:p.Met246Arg
	NM_001276761.1:c.737T>G	NP_001263690.1:p.Met246Arg
	NM_001126113.2:c.737T>G	NP_001119585.1:p.Met246Arg
	NM_001276695.1:c.737T>G	NP_001263624.1:p.Met246Arg
	NM_001126118.1:c.620T>G	NP_001119590.1:p.Met207Arg
	NM_001126117.1:c.260T>G	NP_001119589.1:p.Met87Arg
	NM_001276699.1:c.260T>G	NP_001263628.1:p.Met87Arg
	NM_001126115.1:c.260T>G	NP_001119587.1:p.Met87Arg
	NM_001276697.1:c.260T>G	NP_001263626.1:p.Met87Arg
	NM_001276696.1:c.620T>G	NP_001263625.1:p.Met207Arg
Ensemble	ENST00000604348.6:c.716T>G	ENST00000604348.6:p.Met239Arg
	ENST00000510385.5:c.341T>G	ENST00000510385.5:p.Met114Arg
	ENST00000576024.2:c.737T>G	ENST00000576024.2:p.Met246Arg
	ENST00000269305.9:c.737T>G	ENST00000269305.9:p.Met246Arg
	ENST00000359597.8:c.737T>G	ENST00000359597.8:p.Met246Arg
	ENST00000714409.1:c.737T>G	ENST00000714409.1:p.Met246Arg
	ENST00000413465.6:c.737T>G	ENST00000413465.6:p.Met246Arg
	ENST00000420246.6:c.737T>G	ENST00000420246.6:p.Met246Arg
	ENST00000445888.6:c.737T>G	ENST00000445888.6:p.Met246Arg
	ENST00000455263.6:c.737T>G	ENST00000455263.6:p.Met246Arg
	ENST00000504290.5:c.341T>G	ENST00000504290.5:p.Met114Arg
	ENST00000504937.5:c.341T>G	ENST00000504937.5:p.Met114Arg
	ENST00000610292.4:c.620T>G	ENST00000610292.4:p.Met207Arg
	ENST00000610538.4:c.620T>G	ENST00000610538.4:p.Met207Arg
	ENST00000610623.4:c.260T>G	ENST00000610623.4:p.Met87Arg
	ENST00000618944.4:c.260T>G	ENST00000618944.4:p.Met87Arg
	ENST00000619186.4:c.260T>G	ENST00000619186.4:p.Met87Arg
	ENST00000619485.4:c.620T>G	ENST00000619485.4:p.Met207Arg
	ENST00000620739.4:c.620T>G	ENST00000620739.4:p.Met207Arg
	ENST00000622645.4:c.620T>G	ENST00000622645.4:p.Met207Arg
	ENST00000714356.1:c.620T>G	ENST00000714356.1:p.Met207Arg
	ENST00000714357.1:c.737T>G	ENST00000714357.1:p.Met246Arg
	ENST00000714359.1:c.737T>G	ENST00000714359.1:p.Met246Arg
	ENST00000714408.1:c.737T>G	ENST00000714408.1:p.Met246Arg

Summary

MGeND

Clinical significance	not provided
Variant entry	1
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Conflicting classifications of pathogenicity
Review star
Show details

Links

TP53

Type	Database	ID	Link
Gene	MIM	191170	OMIM
	HGNC	11998	HGNC
	Ensembl	ENSG00000141510	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM3403261	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
not provided		bronchus or lung, unspecified	not provided	MGS000042 (TMGS000093)	Hitoshi Nakagama	National Cancer Center Japan

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Likely pathogenic	2019-09-18	criteria provided, single submitter	not provided	germline	Detail
Uncertain significance	2021-04-16	criteria provided, single submitter	Li-Fraumeni syndrome	germline	Detail
Pathogenic	2022-03-31	criteria provided, single submitter	Hereditary cancer-predisposing syndrome	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.122	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000546.6(TP53):c.737T>G (p.Met246Arg) AND not provided	ClinVar	Detail
NM_000546.6(TP53):c.737T>G (p.Met246Arg) AND Li-Fraumeni syndrome	ClinVar	Detail
NM_000546.6(TP53):c.737T>G (p.Met246Arg) AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs587780074 dbSNP
Genome: hg19
Position: chr17:7,577,544-7,577,544
Variant Type: snv
Reference Allele: A
Alternative Allele: C

Genome browser

chr17:7577544:A>C Detail (hg19) (TP53)

Genome

HGVS

MGeND

Frequency

Prediction

ClinVar

Image provided by the submitter

Annotations

Overlapped Transcript Coordinates

Overlapped Transcript