chr6:32008874:G>C Detail (hg19) (CYP21A2, LOC106780800)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:32,008,874-32,008,874 |
| hg38 | chr6:32,041,097-32,041,097 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | ||
| Ensemble | ENST00000435122.3:c.1361G>C | ENST00000435122.3:p.Arg454Pro |
| ENST00000644719.2:c.1451G>C | ENST00000644719.2:p.Arg484Pro |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:[No Data.] | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:<0.001 |
Prediction
ClinVar
| Clinical Significance | Conflicting classifications of pathogenicity |
| Review star |  |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
Conflicting interpretations of pathogenicity
|
2022-05-22 | criteria provided, conflicting interpretations | Classic congenital adrenal hyperplasia due to 21-hydroxylase deficiency |
germline
|
Detail |
Pathogenic
|
2021-11-03 | criteria provided, multiple submitters, no conflicts | not provided |
germline
unknown
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.294 | congenital adrenal hyperplasia | Three mutants (deletion of E196, G291S, and R483P) of steroid 21-hydroxylase (P4... | BeFree | 9497336 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NM_000500.9(CYP21A2):c.1451G>C (p.Arg484Pro) AND Classic congenital adrenal hyperplasia due to 21-hy... | ClinVar | Detail |
| NM_000500.9(CYP21A2):c.1451G>C (p.Arg484Pro) AND not provided | ClinVar | Detail |
| Three mutants (deletion of E196, G291S, and R483P) of steroid 21-hydroxylase (P450c21) from patients... | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs200005406 dbSNP
- Genome
- hg19
- Position
- chr6:32,008,874-32,008,874
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- C
- East Asian Chromosome Counts (ExAC)
- 5996
- East Asian Allele Counts (ExAC)
- 0
- East Asian Heterozygous Counts (ExAC)
- 0
- East Asian Homozygous Counts (ExAC)
- 0
- East Asian Allele Frequency (ExAC)
- 0.0
- Chromosome Counts in All Race (ExAC)
- 72442
- Allele Counts in All Race (ExAC)
- 32
- Heterozygous Counts in All Race (ExAC)
- 32
- Homozygous Counts in All Race (ExAC)
- 0
- Allele Frequency in All Race (ExAC)
- 4.417326965020292E-4
Genome browser