chr10:91827975:A>G Detail (hg38) (TNKS2)

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Information

Genome

Assembly	Position
hg19	chr10:93,587,732-93,587,732 View the variant detail on this assembly version.
hg38	chr10:91,827,975-91,827,975

Summary

Links

Type	Database	ID	Link
Gene	MIM	607128	OMIM
	HGNC	15677	HGNC
	Ensembl	ENSG00000107854	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar	tgv40185899	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

[No Data.]

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.008	Malignant neoplasm of breast	The strongest association with BC susceptibility was observed for rs3785074 (TER...	BeFree	19766477	Detail
<0.001	breast carcinoma	The strongest association with BC susceptibility was observed for rs3785074 (TER...	BeFree	19766477	Detail

Annotation

Descrption	Source	Links
The strongest association with BC susceptibility was observed for rs3785074 (TERF2, OR 0.51, 95% CI ...	DisGeNET	Detail
The strongest association with BC susceptibility was observed for rs3785074 (TERF2, OR 0.51, 95% CI ...	DisGeNET	Detail

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs10509637 dbSNP
Genome: hg38
Position: chr10:91,827,975-91,827,975
Variant Type: snv
Reference Allele: A
Alternative Allele: G
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831)): PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831)): rs10509637
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831)): 0.0018
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831)): 30
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831)): 16760

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