chr17:7673609:C>T Detail (hg38) (TP53)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
Genome browser

Information

Genome

Assembly	Position
hg19	chr17:7,576,927-7,576,927 View the variant detail on this assembly version.
hg38	chr17:7,673,609-7,673,609

HGVS

TP53

Type	Transcript	Protein
RefSeq	NM_001126117.1:c.443-1G>A
	NM_001276699.1:c.443-1G>A
	NM_000546.5:c.920-1G>A
	NM_001126112.2:c.920-1G>A
	NM_001276760.1:c.920-1G>A
	NM_001276761.1:c.920-1G>A
	NM_001126113.2:c.920-1G>A
	NM_001276695.1:c.920-1G>A
	NM_001126116.1:c.524-1G>A
	NM_001276698.1:c.524-1G>A
	NM_001126118.1:c.803-1G>A
	NM_001126115.1:c.443-1G>A
	NM_001276697.1:c.443-1G>A
	NM_001276696.1:c.803-1G>A
Ensemble	ENST00000610623.4:c.443-1G>A
	ENST00000610538.4:c.803-1G>A
	ENST00000618944.4:c.443-1G>A
	ENST00000269305.9:c.920-1G>A
	ENST00000359597.8:c.920-1G>A
	ENST00000413465.6:c.782+572G>A
	ENST00000420246.6:c.920-1G>A
	ENST00000445888.6:c.920-1G>A
	ENST00000455263.6:c.920-1G>A
	ENST00000504290.5:c.524-1G>A
	ENST00000504937.5:c.524-1G>A
	ENST00000510385.5:c.524-1G>A
	ENST00000576024.2:c.920-1G>A
	ENST00000604348.6:c.899-1G>A
	ENST00000610292.4:c.803-1G>A
	ENST00000619186.4:c.443-1G>A
	ENST00000619485.4:c.803-1G>A
	ENST00000620739.4:c.803-1G>A
	ENST00000622645.4:c.803-1G>A
	ENST00000714356.1:c.803-1G>A
	ENST00000714357.1:c.920-1G>A
	ENST00000714359.1:c.920-1G>A
	ENST00000714408.1:c.920-1G>A
	ENST00000714409.1:c.920-1G>A

Summary

MGeND

Clinical significance	Pathogenic
Variant entry	1
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
Show details

Links

TP53

Type	Database	ID	Link
Gene	MIM	191170	OMIM
	HGNC	11998	HGNC
	Ensembl	ENSG00000141510	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM3727891	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
Pathogenic		salivary gland neoplasms	somatic	MGS000044 (TMGS000097)	Kohei Miyazono	Tokyo University

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2022-06-18	criteria provided, multiple submitters, no conflicts	Hereditary cancer-predisposing syndrome	germline	Detail
Pathogenic	2019-10-16	criteria provided, multiple submitters, no conflicts	not provided	germline not applicable	Detail
Likely pathogenic	2018-12-01	no assertion criteria provided	Neoplasm of ovary	somatic	Detail
Pathogenic	2022-01-27	criteria provided, single submitter	Li-Fraumeni syndrome	germline	Detail
Pathogenic	2022-06-18	criteria provided, single submitter	Li-Fraumeni syndrome 1	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.122	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000546.6(TP53):c.920-1G>A AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_000546.6(TP53):c.920-1G>A AND not provided	ClinVar	Detail
NM_000546.6(TP53):c.920-1G>A AND Neoplasm of ovary	ClinVar	Detail
NM_000546.6(TP53):c.920-1G>A AND Li-Fraumeni syndrome	ClinVar	Detail
NM_000546.6(TP53):c.920-1G>A AND Li-Fraumeni syndrome 1	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs587781702 dbSNP
Genome: hg38
Position: chr17:7,673,609-7,673,609
Variant Type: snv
Reference Allele: C
Alternative Allele: T

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