chr2:207641155:T>C Detail (hg38)

Information

Genome

Assembly Position
hg19 chr2:208,505,879-208,505,879 View the variant detail on this assembly version.
hg38 chr2:207,641,155-207,641,155

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.179
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.012 Mental Depression One hundred-ninety MD patients collected in the context of a resistant depressio... BeFree 20643483 Detail
0.004 depressive disorder One hundred-ninety MD patients collected in the context of a resistant depressio... BeFree 20643483 Detail
Annotation

Annotations

DescrptionSourceLinks
One hundred-ninety MD patients collected in the context of a resistant depression study and treated ... DisGeNET Detail
One hundred-ninety MD patients collected in the context of a resistant depression study and treated ... DisGeNET Detail
Gene
-
dbSNP
rs7594560 dbSNP
Genome
hg38
Position
chr2:207,641,155-207,641,155
Variant Type
snv
Reference Allele
T
Alternative Allele
C
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs7594560
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.1795
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
3009
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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