chr7:150958319:T>A Detail (hg38) (KCNH2)

Information

Genome

Assembly Position
hg19 chr7:150,655,407-150,655,407 View the variant detail on this assembly version.
hg38 chr7:150,958,319-150,958,319

HGVS

Type Transcript Protein
RefSeq NM_000238.3:c.656A>T NP_000229.1:p.Asp219Val
Ensemble ENST00000262186.10:c.656A>T ENST00000262186.10:p.Asp219Val
ENST00000713701.1:c.356A>T ENST00000713701.1:p.Asp119Val
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:[No Data.]
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:<0.001

Prediction

ClinVar

Clinical Significance Uncertain significance
Review star
Show details
Links
Type Database ID Link
Gene MIM 152427 OMIM
HGNC 6251 HGNC
Ensembl ENSG00000055118 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Pathogenic no assertion criteria provided long QT syndrome 2 unknown Detail
Uncertain significance 2024-01-08 criteria provided, multiple submitters, no conflicts long QT syndrome germline unknown Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.361 long QT syndrome 2 NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_000238.4(KCNH2):c.656A>T (p.Asp219Val) AND Long QT syndrome 2 ClinVar Detail
NM_000238.4(KCNH2):c.656A>T (p.Asp219Val) AND Long QT syndrome ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs587777907 dbSNP
Genome
hg38
Position
chr7:150,958,319-150,958,319
Variant Type
snv
Reference Allele
T
Alternative Allele
A
East Asian Chromosome Counts (ExAC)
354
East Asian Allele Counts (ExAC)
0
East Asian Heterozygous Counts (ExAC)
0
East Asian Homozygous Counts (ExAC)
0
East Asian Allele Frequency (ExAC)
0.0
Chromosome Counts in All Race (ExAC)
12086
Allele Counts in All Race (ExAC)
2
Heterozygous Counts in All Race (ExAC)
2
Homozygous Counts in All Race (ExAC)
0
Allele Frequency in All Race (ExAC)
1.6548072149594572E-4
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