LTBR lymphotoxin beta receptor
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 28 |
| Likely benign | 0 | 12 |
| Conflicting classifications of pathogenicity | 0 | 2 |
| Uncertain significance | 0 | 38 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
4 |
 |
72 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
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| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | D12S370 |
| SYNONYM | LT-BETA-R |
| SYNONYM | TNF-R-III |
| SYNONYM | TNFCR |
| SYNONYM | TNFR-RP |
| SYNONYM | TNFR2-RP |
| SYNONYM | TNFR3 |
| SYNONYM | TNFRSF3 |
| MIM | 600979 OMIM |
| HGNC | HGNC:6718 HGNC |
| Ensembl | ENSG00000111321 Ensembl |
| AllianceGenome | HGNC:6718 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000539925.5 | hg38 | chr12 | 6,375,429 | 6,391,224 | 15,796 |
| ENST00000228918.9 | hg38 | chr12 | 6,384,162 | 6,391,566 | 7,405 |
| ENST00000541102.1 | hg38 | chr12 | 6,385,119 | 6,391,111 | 5,993 |
| ENST00000543190.5 | hg38 | chr12 | 6,384,253 | 6,388,506 | 4,254 |
| ENST00000539925.5 | hg19 | chr12 | 6,484,595 | 6,500,390 | 15,796 |
| ENST00000228918.9 | hg19 | chr12 | 6,493,328 | 6,500,732 | 7,405 |
| ENST00000543190.5 | hg19 | chr12 | 6,493,419 | 6,497,672 | 4,254 |
| ENST00000541102.1 | hg19 | chr12 | 6,494,285 | 6,500,277 | 5,993 |
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