TRIM39 tripartite motif containing 39

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
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Information

Symbol: TRIM39
Type: protein-coding
Description: tripartite motif containing 39
Entrez Gene ID: 56658
Genome: hg19
Position: chr6:30,294,621-30,311,505
Genome: hg38
Position: chr6:30,326,844-30,343,728
MIM: 605700 OMIM
HGNC: HGNC:10065 HGNC
Ensembl: ENSG00000204599 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Likely benign	0	8
not provided	5	0
Uncertain significance	0	10

Ranking

	ClinVar
	0
	0
	0
	18
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	RNF23
SYNONYM	TFP
SYNONYM	TRIM39B
MIM	605700 OMIM
HGNC	HGNC:10065 HGNC
Ensembl	ENSG00000204599 Ensembl
AllianceGenome	HGNC:10065

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000396551.9	hg38	chr6	30,326,927	30,343,729	16,803
ENST00000396548.5	hg38	chr6	30,326,920	30,343,729	16,810
ENST00000396547.5	hg38	chr6	30,328,889	30,343,729	14,841
ENST00000376656.8	hg38	chr6	30,326,844	30,343,728	16,885
ENST00000376659.9	hg38	chr6	30,327,259	30,343,729	16,471
ENST00000376656.8	hg19	chr6	30,294,621	30,311,505	16,885
ENST00000396548.5	hg19	chr6	30,294,697	30,311,506	16,810
ENST00000396551.9	hg19	chr6	30,294,704	30,311,506	16,803
ENST00000376659.9	hg19	chr6	30,295,036	30,311,506	16,471
ENST00000396547.5	hg19	chr6	30,296,666	30,311,506	14,841

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