ENST00000376656.8 TRIM39

Information
Transcript ID
ENST00000376656.8
Genome
hg19
Position
chr6:30,294,621-30,311,505
Strand
+
CDS length
1,557
Amino acid length
519
Gene symbol
TRIM39
Gene type
protein-coding
Gene description
tripartite motif containing 39
Gene Entrez Gene ID
56658
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 30,294,621 30,294,772
2 30,296,666 30,296,818
3 30,297,088 30,297,547
4 30,298,558 30,298,653
5 30,303,522 30,303,752
6 30,307,685 30,307,707
7 30,308,049 30,308,138
8 30,308,282 30,308,397
9 30,309,489 30,311,505
CDS
Exon number Type Start Stop
3 CDS 30,297,095 30,297,547
4 CDS 30,298,558 30,298,653
5 CDS 30,303,522 30,303,752
6 CDS 30,307,685 30,307,707
7 CDS 30,308,049 30,308,138
8 CDS 30,308,282 30,308,397
9 CDS 30,309,489 30,310,036
Other genome
Genome Chromosome Start End Links
hg38 chr6 30,326,844 30,343,728 Link
CDS sequence
ATGGCAGAGACAAGTCTGTTAGAGGCTGGGGCCTCTGCAGCCTCTACAGCTGCGGCTTTGGAGAACTTACAGGTGGAGGCGAGCTGCTCTGTGTGCCTGGAGTATCTGAAGGAACCTGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGACCTAGAGAGGGACTTCCCTTGTCCTGTCTGTCGAAAGACATCCCGCTACCGCAGTCTCCGACCTAATCGGCAACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTGCCCCCAACACCATGAGGCCCTCAGCCTTTTCTGTTATGAGGACCAGGAGGCTGTATGCTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACCGTTGTGCCACTGGACGATGCTACACAGGAGTACAAGGAAAAACTGCAGAAGTGTCTGGAGCCCCTGGAACAGAAGCTGCAGGAGATCACTCGCTGCAAGTCCTCTGAGGAGAAGAAGCCTGGTGAGCTCAAGAGACTAGTGGAAAGTCGCCGACAGCAGATCTTGAGGGAGTTTGAAGAGCTTCATAGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAAGAAGAGGAACAGGACATTCTGCAGCGACTCCGAGAAAATGCTGCTCACCTTGGGGACAAGCGCCGGGACCTGGCCCACTTGGCTGCCGAGGTGGAGGGCAAGTGCTTACAGTCAGGCTTCGAGATGCTTAAGGATGTCAAAAGTACCCTGGAAAAGAATATTCCTAGAAAGTTCGGAGGCTCACTCTCAACGATCTGTCCACGGGATCATAAGGCTCTCCTTGGATTAGTAAAAGAAATCAACAGATGTGAAAAGGTGAAGACCATGGAGGTGACTTCAGTATCCATAGAGCTGGAAAAGAACTTCAGCAATTTTCCCCGACAGTACTTTGCCCTAAGGAAAATCCTTAAACAGCTAATTGCGGATGTGACCCTGGACCCTGAGACAGCTCATCCTAACCTAGTCCTGTCAGAGGATCGTAAGAGCGTCAAGTTCGTGGAGACAAGACTCCGGGATCTCCCTGACACACCAAGGCGTTTCACCTTCTACCCTTGCGTCCTGGCTACTGAGGGTTTCACCTCAGGTCGACACTACTGGGAGGTGGAGGTGGGCGACAAGACCCACTGGGCAGTGGGTGTATGCCGGGACTCCGTGAGCCGAAAGGGCGAGTTGACTCCACTCCCTGAGACTGGCTACTGGCGGGTGCGGCTATGGAATGGGGACAAATATGCAGCCACCACCACACCTTTTACCCCTTTGCACATCAAGGTGAAACCCAAGCGGGTAGGCATATTCCTAGACTATGAGGCCGGCACACTGTCTTTCTACAATGTCACAGACCGCTCTCATATCTACACCTTCACTGATACTTTTACTGAGAAACTTTGGCCCCTCTTCTACCCAGGCATCCGGGCTGGACGGAAGAATGCTGCACCACTTACCATCAGGCCCCCAACAGATTGGGAGTGA
Amino sequence
MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKNIPRKFGGSLSTICPRDHKALLGLVKEINRCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE*