LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Information
- Symbol
- LSM2
- Type
- protein-coding
- Description
- LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
- Entrez Gene ID
- 57819
- Genome
- hg19
- Position
- chr6:31,765,173-31,774,743
- Genome
- hg38
- Position
- chr6:31,797,396-31,806,966
- MIM
- 607282 OMIM
- HGNC
- HGNC:13940 HGNC
- Ensembl
- ENSG00000204392 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 4 | 0 |
Ranking
| ClinVar | |
|---|---|
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Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C6orf28 |
| SYNONYM | G7B |
| SYNONYM | YBL026W |
| SYNONYM | snRNP |
| MIM | 607282 OMIM |
| HGNC | HGNC:13940 HGNC |
| Ensembl | ENSG00000204392 Ensembl |
| AllianceGenome | HGNC:13940 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000375661.6 | hg38 | chr6 | 31,797,396 | 31,806,966 | 9,571 |
| ENST00000375661.6 | hg19 | chr6 | 31,765,173 | 31,774,743 | 9,571 |
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