ENST00000375661.6 LSM2

Information
Transcript ID
ENST00000375661.6
Genome
hg19
Position
chr6:31,765,173-31,774,743
Strand
-
CDS length
288
Amino acid length
96
Gene symbol
LSM2
Gene type
protein-coding
Gene description
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Entrez Gene ID
57819
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 31,765,173 31,765,659
4 31,765,767 31,765,826
3 31,766,254 31,766,284
2 31,773,852 31,773,919
1 31,774,532 31,774,743
CDS
Exon number Type Start Stop
5 CDS 31,765,534 31,765,659
4 CDS 31,765,767 31,765,826
3 CDS 31,766,254 31,766,284
2 CDS 31,773,852 31,773,919
1 CDS 31,774,532 31,774,534
Other genome
Genome Chromosome Start End Links
hg38 chr6 31,797,396 31,806,966 Link
CDS sequence
ATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATACGTGCAGCTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCGGCAAGGAAGGAAGCCCTGCAGCAGAAACAGTGA
Amino sequence
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ*