CCL20 C-C motif chemokine ligand 20

Information
Symbol
CCL20
Type
protein-coding
Description
C-C motif chemokine ligand 20
Entrez Gene ID
6364
Genome
hg19
Position
chr2:228,678,558-228,682,272
Genome
hg38
Position
chr2:227,813,842-227,817,556
MIM
601960 OMIM
HGNC
HGNC:10619 HGNC
Ensembl
ENSG00000115009 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 2
Likely benign 0 4
Uncertain significance 0 2
Ranking
ClinVar
0
0
0
8
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM CKb4
SYNONYM Exodus
SYNONYM LARC
SYNONYM MIP-3-alpha
SYNONYM MIP-3a
SYNONYM MIP3A
SYNONYM SCYA20
SYNONYM ST38
MIM 601960 OMIM
HGNC HGNC:10619 HGNC
Ensembl ENSG00000115009 Ensembl
AllianceGenome HGNC:10619
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000358813.5 hg38 chr2 227,813,842 227,817,556 3,715
ENST00000409189.7 hg38 chr2 227,813,842 227,817,564 3,723
ENST00000358813.5 hg19 chr2 228,678,558 228,682,272 3,715
ENST00000409189.7 hg19 chr2 228,678,558 228,682,280 3,723
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