ENST00000409189.7 CCL20

Information
Transcript ID
ENST00000409189.7
Genome
hg19
Position
chr2:228,678,558-228,682,280
Strand
+
CDS length
288
Amino acid length
96
Gene symbol
CCL20
Gene type
protein-coding
Gene description
C-C motif chemokine ligand 20
Gene Entrez Gene ID
6364
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 228,678,558 228,678,703
2 228,680,173 228,680,284
3 228,681,023 228,681,100
4 228,681,778 228,682,280
CDS
Exon number Type Start Stop
1 CDS 228,678,628 228,678,703
2 CDS 228,680,173 228,680,284
3 CDS 228,681,023 228,681,100
4 CDS 228,681,778 228,681,799
Other genome
Genome Chromosome Start End Links
hg38 chr2 227,813,842 227,817,564 Link
CDS sequence
ATGTGCTGTACCAAGAGTTTGCTCCTGGCTGCTTTGATGTCAGTGCTGCTACTCCACCTCTGCGGCGAATCAGAAGCAAGCAACTTTGACTGCTGTCTTGGATACACAGACCGTATTCTTCATCCTAAATTTATTGTGGGCTTCACACGGCAGCTGGCCAATGAAGGCTGTGACATCAATGCTATCATCTTTCACACAAAGAAAAAGTTGTCTGTGTGCGCAAATCCAAAACAGACTTGGGTGAAATATATTGTGCGTCTCCTCAGTAAAAAAGTCAAGAACATGTAA
Amino sequence
MCCTKSLLLAALMSVLLLHLCGESEASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSKKVKNM*