SPP1 secreted phosphoprotein 1

Information
Symbol
SPP1
Type
protein-coding
Description
secreted phosphoprotein 1
Entrez Gene ID
6696
Genome
hg19
Position
chr4:88,896,981-88,904,681
Genome
hg38
Position
chr4:87,975,829-87,983,529
MIM
166490 OMIM
HGNC
HGNC:11255 HGNC
Ensembl
ENSG00000118785 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 6
Likely benign 0 18
Uncertain significance 0 30
Ranking
ClinVar
0
0
4
48
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM BNSP
SYNONYM BSPI
SYNONYM ETA-1
SYNONYM OPN
MIM 166490 OMIM
HGNC HGNC:11255 HGNC
Ensembl ENSG00000118785 Ensembl
AllianceGenome HGNC:11255
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000614857.5 hg38 chr4 87,975,829 87,983,529 7,701
ENST00000682655.1 hg38 chr4 87,975,714 87,981,991 6,278
ENST00000360804.4 hg38 chr4 87,975,714 87,983,127 7,414
ENST00000508233.6 hg38 chr4 87,975,714 87,982,896 7,183
ENST00000237623.11 hg38 chr4 87,975,667 87,983,426 7,760
ENST00000395080.8 hg38 chr4 87,975,714 87,983,411 7,698
ENST00000237623.11 hg19 chr4 88,896,819 88,904,578 7,760
ENST00000360804.4 hg19 chr4 88,896,866 88,904,279 7,414
ENST00000395080.8 hg19 chr4 88,896,866 88,904,563 7,698
ENST00000508233.6 hg19 chr4 88,896,866 88,904,048 7,183
ENST00000614857.5 hg19 chr4 88,896,981 88,904,681 7,701
ENST00000682655.1 hg19 chr4 88,896,866 88,903,143 6,278
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