ENST00000682655.1 SPP1

Information
Transcript ID
ENST00000682655.1
Genome
hg19
Position
chr4:88,896,866-88,903,143
Strand
+
CDS length
579
Amino acid length
193
Gene symbol
SPP1
Gene type
protein-coding
Gene description
secreted phosphoprotein 1
Gene Entrez Gene ID
6696
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,896,866 88,896,952
2 88,898,034 88,898,101
3 88,898,211 88,898,249
4 88,901,198 88,901,278
5 88,901,545 88,901,586
6 88,902,627 88,903,143
CDS
Exon number Type Start Stop
2 CDS 88,898,048 88,898,101
3 CDS 88,898,211 88,898,249
4 CDS 88,901,198 88,901,278
5 CDS 88,901,545 88,901,586
6 CDS 88,902,627 88,902,989
Other genome
Genome Chromosome Start End Links
hg38 chr4 87,975,714 87,981,991 Link
CDS sequence
ATGAGAATTGCAGTGATTTGCTTTTGCCTCCTAGGCATCACCTGTGCCATACCAGTTAAACAGGCTGATTCTGGAAGTTCTGAGGAAAAGCAGCTTTACAACAAATACCCAGATGCTGTGGCCACATGGCTAAACCCTGACCCATCTCAGAAGCAGAATCTCCTAGCCCCACAGAATGCTGTGTCCTCTGAAGAAACCAATGACTTTAAACAAGAGACCCTTCCAAGTAAGTCCAACGAAAGCCATGACCACATGGATGATATGGATGATGAAGATGATGATGACCATGTGGACAGCCAGGACTCCATTGACTCGAACGACTCTGATGATGTAGATGACACTGATGATTCTCACCAGTCTGATGAGTCTCACCATTCTGATGAATCTGATGAACTGGTCACTGATTTTCCCACGGACCTGCCAGCAACCGAAGTTTTCACTCCAGTTGTCCCCACAGTAGACACATATGATGGCCGAGGTGATAGTGTGGTTTATGGACTGAGGTCAAAATCTAAGAAGTTTCGCAGACCTGACATCCAGGTAAATCCTTTAACAGACACACCTGATGGTTCTGACTAG
Amino sequence
MRIAVICFCLLGITCAIPVKQADSGSSEEKQLYNKYPDAVATWLNPDPSQKQNLLAPQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQVNPLTDTPDGSD*