HAVCR2 hepatitis A virus cellular receptor 2

Information
Symbol
HAVCR2
Type
protein-coding
Description
hepatitis A virus cellular receptor 2
Entrez Gene ID
84868
Genome
hg19
Position
chr5:156,512,868-156,540,206
Genome
hg38
Position
chr5:157,085,857-157,113,195
MIM
606652 OMIM
HGNC
HGNC:18437 HGNC
Ensembl
ENSG00000135077 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 14
Likely benign 0 16
Conflicting classifications of pathogenicity 0 4
Uncertain significance 0 50
Ranking
ClinVar
0
0
6
70
2
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM CD366
SYNONYM HAVcr-2
SYNONYM KIM-3
SYNONYM SPTCL
SYNONYM TIM3
SYNONYM TIMD-3
SYNONYM TIMD3
SYNONYM Tim-3
MIM 606652 OMIM
HGNC HGNC:18437 HGNC
Ensembl ENSG00000135077 Ensembl
AllianceGenome HGNC:18437
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000307851.9 hg38 chr5 157,085,832 157,109,044 23,213
ENST00000696899.1 hg38 chr5 157,085,857 157,113,195 27,339
ENST00000696897.1 hg38 chr5 157,085,884 157,109,045 23,162
ENST00000522593.6 hg38 chr5 157,085,867 157,109,122 23,256
ENST00000517358.3 hg38 chr5 157,085,839 157,107,349 21,511
ENST00000524219.2 hg38 chr5 157,087,078 157,142,869 55,792
ENST00000696902.1 hg38 chr5 157,085,422 157,109,079 23,658
ENST00000696900.1 hg38 chr5 157,085,867 157,109,248 23,382
ENST00000696902.1 hg19 chr5 156,512,433 156,536,090 23,658
ENST00000307851.9 hg19 chr5 156,512,843 156,536,055 23,213
ENST00000517358.3 hg19 chr5 156,512,850 156,534,360 21,511
ENST00000696899.1 hg19 chr5 156,512,868 156,540,206 27,339
ENST00000522593.6 hg19 chr5 156,512,878 156,536,133 23,256
ENST00000696900.1 hg19 chr5 156,512,878 156,536,259 23,382
ENST00000696897.1 hg19 chr5 156,512,895 156,536,056 23,162
ENST00000524219.2 hg19 chr5 156,514,089 156,569,880 55,792
Genome browser