ENST00000524219.2 HAVCR2

Information
Transcript ID
ENST00000524219.2
Genome
hg19
Position
chr5:156,514,089-156,569,880
Strand
-
CDS length
555
Amino acid length
185
Gene symbol
HAVCR2
Gene type
protein-coding
Gene description
hepatitis A virus cellular receptor 2
Gene Entrez Gene ID
84868
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 156,514,089 156,514,305
6 156,515,952 156,515,988
5 156,522,317 156,522,470
4 156,525,869 156,525,912
3 156,531,677 156,531,760
2 156,533,638 156,533,973
1 156,569,831 156,569,880
CDS
Exon number Type Start Stop
7 CDS 156,514,113 156,514,305
6 CDS 156,515,952 156,515,988
5 CDS 156,522,317 156,522,470
4 CDS 156,525,869 156,525,912
3 CDS 156,531,677 156,531,760
2 CDS 156,533,638 156,533,680
Other genome
Genome Chromosome Start End Links
hg38 chr5 157,087,078 157,142,869 Link
CDS sequence
ATGAATGATGAAAAATTTAACCTGAAGTTGGTCATCAAACCAGCCAAGGTCACCCCTGCACCGACTCGGCAGAGAGACTTCACTGCAGCCTTTCCAAGGATGCTTACCACCAGGGGACATGGCCCAGCAGAGACACAGACACTGGGGAGCCTCCCTGATATAAATCTAACACAAATATCCACATTGGCCAATGAGTTACGGGACTCTAGATTGGCCAATGACTTACGGGACTCTGGAGCAACCATCAGAATAGGCATCTACATCGGAGCAGGGATCTGTGCTGGGCTGGCTCTGGCTCTTATCTTCGGCGCTTTAATTTTCAAATGGTATTCTCATAGCAAAGAGAAGATACAGAATTTAAGCCTCATCTCTTTGGCCAACCTCCCTCCCTCAGGATTGGCAAATGCAGTAGCAGAGGGAATTCGCTCAGAAGAAAACATCTATACCATTGAAGAGAACGTATATGAAGTGGAGGAGCCCAATGAGTATTATTGCTATGTCAGCAGCAGGCAGCAACCCTCACAACCTTTGGGTTGTCGCTTTGCAATGCCATAG
Amino sequence
MNDEKFNLKLVIKPAKVTPAPTRQRDFTAAFPRMLTTRGHGPAETQTLGSLPDINLTQISTLANELRDSRLANDLRDSGATIRIGIYIGAGICAGLALALIFGALIFKWYSHSKEKIQNLSLISLANLPPSGLANAVAEGIRSEENIYTIEENVYEVEEPNEYYCYVSSRQQPSQPLGCRFAMP*